Part of scaffold_592 (Scaffold)

For more information consult the page for scaffold_592 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTSS ENSTTRG00000007385 (Bottlenosed dolphin)

Gene Details

cathepsin S

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006987, Bottlenosed dolphin)

Protein Percentage 88.75%
cDNA percentage 91.29%
Ka/Ks Ratio 0.54094 (Ka = 0.0803, Ks = 0.1484)

CTSS ENSBTAG00000017135 (Cow)

Gene Details

Cathepsin S

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022774, Cow)

Protein Percentage 82.78%
cDNA percentage 87.41%
Ka/Ks Ratio 0.49523 (Ka = 0.1156, Ks = 0.2335)

CTSS  (Minke Whale)

Gene Details

cathepsin S

External Links

Gene match (Identifier: BACU007234, Minke Whale)

Protein Percentage 89.73%
cDNA percentage 92.35%
Ka/Ks Ratio 0.71948 (Ka = 0.0764, Ks = 0.1062)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1011 bp    Location:486109..494808   Strand:+
>bmy_11141
ATGAAATGGCTGGTGTGGGTGCTCCTGTTGTGCTCCTCTGTGATGGCACAACAGCACAGAGACTCCACTCTGGATCATCACTGGAATCTCTGGAAGAAAACCTATGGGAAACAATACAAGGAACAGAATGAGGAAGTAGCACGGCGTCTCATCTGGGAAAAGAATCTAAAAACTGTGATGCTTCACAATCTGGAGCATTCAATGGGAATGCATTCATATGATCTAGGCATGAACCACCTGGGAGACATGACCAGTGAAGAAGTGATATCTTTGATGAGTTCCCTGAGAGTTCCCAGCCAATGGCAGAGAAATGTCACTTACAAGTCAAACCCTAATCAGAAATTACCTGATTCTCTGGACTGGAGAGAGAAGGGGTGTGTTACTGAAGTGAAATACCAGGGCTCCTGTGGTGCTTGTTGGGCTTTCAGTGCTGTGGGAGCCCTGGAAGCACAAGTGAAGCTGAAAACAGGAAAGCTGGTGTCTCTGAGTGCACAGAACCTGGTGGATTGCTCAACTGAAAAATATGGGAATAAAGGCTGTAATGGTGGCTTCATGACAGAGGCTTTCCAATATATCATTGATAACAACGGCATCGATTCAGAAGCTTCCTATCCCTACAAAGCCATGGATGAAAAGTGCCAGTATGACGCAAAAAATCGAGCTGCCACGTGTTCAAGGTATATTGAACTTCCCTTCGGCAGTGAAGATGCCTTAAAAGAAGCTGTGGCCAACAAAGGACCTGTGTCTGTTGCTATAGATGCACGCCATTCTTCTTTCTTCCTCTACAGAAGTGGTGTCTACTATGACCCCTTGTGTACTCAGGCTGTGAATCACGGTGTACTGGTGATTGGCTATGGTAACCTTAACGGGAGAGACTACTGGCTTGTGAAAAACAGGTACTCACACTTTAATGTATATTTAAATAAAATCAGGAATTTGAGGGAGCCTCAACCAATGCTTTCTTGTGATTATGATGATGATCATCATGATATTGAAAATGGTGAATATTTA

Related Sequences

bmy_11141T0 Protein

Length: 337 aa      View alignments
>bmy_11141T0
MKWLVWVLLLCSSVMAQQHRDSTLDHHWNLWKKTYGKQYKEQNEEVARRLIWEKNLKTVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVISLMSSLRVPSQWQRNVTYKSNPNQKLPDSLDWREKGCVTEVKYQGSCGACWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDEKCQYDAKNRAATCSRYIELPFGSEDALKEAVANKGPVSVAIDARHSSFFLYRSGVYYDPLCTQAVNHGVLVIGYGNLNGRDYWLVKNRYSHFNVYLNKIRNLREPQPMLSCDYDDDHHDIENGEYL