Sequence detailsbmy_11154 (Coding sequence)

Part of scaffold_592 (SequenceType object (1))

For more information consult the page for scaffold_592 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1orf54ENSTTRG00000005198 (Bottlenosed dolphin)

Gene Details

chromosome 1 open reading frame 54

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004885, Bottlenosed dolphin)

Protein Percentage 69.0%
cDNA percentage 71.33%
Ka/Ks Ratio 99.0 (Ka = 0.0133, Ks = 0.0001)

C3H1orf54ENSBTAG00000021485 (Cow)

Gene Details

Uncharacterized protein C1orf54 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028638, Cow)

Protein Percentage 72.5%
cDNA percentage 81.94%
Ka/Ks Ratio 0.61663 (Ka = 0.1921, Ks = 0.3116)

Additional orthologs identified in other species via the OPTIC pipeline.

C1orf54 (Human)   BC028528 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 444 bp    Location:859608..852786   Strand:-
Raw sequence 
>bmy_11154
ATGCAGCAGGTGCTTGGAGAGTCTGACAATGATGTTGATATTGTTCCCATACTTCGTAGCACTAGTGCAGAATCCAGAATGGATGTCCTCTTTGTAGCCATCCTTGCTGTGCCACTCATCCTGGGACAAGAATATGAGGATGAAGAAGGACTGGAAGAGGATGACTATTATCAGGTGGTCTATTATTACACAGTCACCCCCAACTATGATGACTTTGGTGCAAACTTCACTGTTGATTACTCTATGTTTGAGTCAGAGAACAGGCTGAACAAGTTGGATGAGGAGGTAATGGAAGCAGTAGAGACTACCATTAGTCGTGAAACAGACCCTGCAGACCATCAGAAGCCTGTAACAGAGAAACCAGTGACAATGGAACCAGAGAGGGAAGGCTGCTACGACTCATTGGATGGGGATTTGGGAAGAGGAGAGTGGAAGATTAAATAA

Related Sequences

bmy_11154T0 SequenceType object (3)

Length: 148 aa      View alignments
>bmy_11154T0
MQQVLGESDNDVDIVPILRSTSAESRMDVLFVAILAVPLILGQEYEDEEGLEEDDYYQVVYYYTVTPNYDDFGANFTVDYSMFESENRLNKLDEEVMEAVETTISRETDPADHQKPVTEKPVTMEPEREGCYDSLDGDLGRGEWKIK*