Part of scaffold_592 (Scaffold)

For more information consult the page for scaffold_592 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APH1A ENSTTRG00000005175 (Bottlenosed dolphin)

Gene Details

APH1A gamma secretase subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004874, Bottlenosed dolphin)

Protein Percentage 55.06%
cDNA percentage 54.66%
Ka/Ks Ratio 0.14424 (Ka = 0.0107, Ks = 0.0741)

APH1A ENSBTAG00000021482 (Cow)

Gene Details

gamma-secretase subunit APH-1A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043457, Cow)

Protein Percentage 99.6%
cDNA percentage 98.11%
Ka/Ks Ratio 0.03533 (Ka = 0.002, Ks = 0.0576)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 909 bp    Location:861388..864958   Strand:+
>bmy_11155
TGTATCTGGGGTTTCGGTGTCCCCGCCTTCCCGGGGGTCCGGGGTGACATTGCACCGCGCCCCTCACGGGGTCGCGTCGCCACCCCACGCGGACTCCCTGGCTGGCGTGCTTCATCCCTTCGCCTCTCTTGGCCGGGCCCCCACGTCGCCCCCAGCTGCCCAGCCATGGGGGCCGCAGTGTTTTTCGGATGCACTTTCGTCGCTTTCGGCCCGGCCTTTGCGCTTTTCTTGATCACTGTGGCAGGAGACCCGCTTCGCGTCATCATCTTGGTCGCCGGGGCATTTTTCTGGCTGGTCTCCCTGCTCTTGGCCTCTGTGGTCTGGTTCATCTTGGTCCATGTGACCGACCGGTCAGATGCCCGACTCCAGTATGGCCTCCTGATTTTTGGTGCTGCAGTCTCTGTCCTTCTACAGGAGGTGTTCCGCTTTGCCTACTACAAGCTGCTTAAGAAGGCAGATGAGGGGTTAGCATCGCTGAGTGAGGACGGAAGATCACCAATCTCCATCCGCCAGATGGCCTATGTTTCTGGTCTTTCCTTCGGTATCATCAGTGGTGTCTTCTCTGTTATCAATATTTTGGCTGATGCACTTGGGCCAGGTGTGGTTGGGATCCATGGAGACTCACCCTATTACTTCTTGACTTCAGCCTTTCTGACAGCAGCCATTATCCTGCTCCATACCTTTTGGGGAGTTGTGTTCTTTGATGCCTGTGAGAGGAGACGGTACTGGGCTTTGGGCCTGGTGGTTGGGAGTCACCTACTGACATCGGGACTGACATTCCTGAACCCCTGGTACGAGGCCAGCCTGCTGCCCATCTATGCAGTCACTGTTTCCATGGGGCTCTGGGCCTTCATCACAGCTGGAGGGTCCTTCCGAAGTATCCAGCGCAGTCTCTCGTGTAAGGACTGA

Related Sequences

bmy_11155T0 Protein

Length: 303 aa      View alignments
>bmy_11155T0
CIWGFGVPAFPGVRGDIAPRPSRGRVATPRGLPGWRASSLRLSWPGPHVAPSCPAMGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVTDRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMGLWAFITAGGSFRSIQRSLSCKD*