Part of scaffold_592 (SequenceType object (1))

For more information consult the page for scaffold_592 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APH1AENSTTRG00000005175 (Bottlenosed dolphin)

Gene Details

APH1A gamma secretase subunit

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004874, Bottlenosed dolphin)

Protein Percentage 55.06%
cDNA percentage 54.66%
Ka/Ks Ratio 0.14424 (Ka = 0.0107, Ks = 0.0741)

APH1AENSBTAG00000021482 (Cow)

Gene Details

gamma-secretase subunit APH-1A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000043457, Cow)

Protein Percentage 99.6%
cDNA percentage 98.11%
Ka/Ks Ratio 0.03533 (Ka = 0.002, Ks = 0.0576)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 909 bp    Location:861388..864958   Strand:+
>bmy_11155
TGTATCTGGGGTTTCGGTGTCCCCGCCTTCCCGGGGGTCCGGGGTGACATTGCACCGCGCCCCTCACGGGGTCGCGTCGCCACCCCACGCGGACTCCCTGGCTGGCGTGCTTCATCCCTTCGCCTCTCTTGGCCGGGCCCCCACGTCGCCCCCAGCTGCCCAGCCATGGGGGCCGCAGTGTTTTTCGGATGCACTTTCGTCGCTTTCGGCCCGGCCTTTGCGCTTTTCTTGATCACTGTGGCAGGAGACCCGCTTCGCGTCATCATCTTGGTCGCCGGGGCATTTTTCTGGCTGGTCTCCCTGCTCTTGGCCTCTGTGGTCTGGTTCATCTTGGTCCATGTGACCGACCGGTCAGATGCCCGACTCCAGTATGGCCTCCTGATTTTTGGTGCTGCAGTCTCTGTCCTTCTACAGGAGGTGTTCCGCTTTGCCTACTACAAGCTGCTTAAGAAGGCAGATGAGGGGTTAGCATCGCTGAGTGAGGACGGAAGATCACCAATCTCCATCCGCCAGATGGCCTATGTTTCTGGTCTTTCCTTCGGTATCATCAGTGGTGTCTTCTCTGTTATCAATATTTTGGCTGATGCACTTGGGCCAGGTGTGGTTGGGATCCATGGAGACTCACCCTATTACTTCTTGACTTCAGCCTTTCTGACAGCAGCCATTATCCTGCTCCATACCTTTTGGGGAGTTGTGTTCTTTGATGCCTGTGAGAGGAGACGGTACTGGGCTTTGGGCCTGGTGGTTGGGAGTCACCTACTGACATCGGGACTGACATTCCTGAACCCCTGGTACGAGGCCAGCCTGCTGCCCATCTATGCAGTCACTGTTTCCATGGGGCTCTGGGCCTTCATCACAGCTGGAGGGTCCTTCCGAAGTATCCAGCGCAGTCTCTCGTGTAAGGACTGA

Related Sequences

bmy_11155T0 SequenceType object (3)

Length: 303 aa      View alignments
>bmy_11155T0
CIWGFGVPAFPGVRGDIAPRPSRGRVATPRGLPGWRASSLRLSWPGPHVAPSCPAMGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVTDRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMGLWAFITAGGSFRSIQRSLSCKD*