Sequence detailsbmy_11161 (Coding sequence)

Part of scaffold_604 (SequenceType object (1))

For more information consult the page for scaffold_604 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STX18 (Minke Whale)

Gene Details

syntaxin 18

External Links

Gene match (Identifier: BACU014361, Minke Whale)

Protein Percentage 98.13%
cDNA percentage 98.13%
Ka/Ks Ratio 0.62592 (Ka = 0.0164, Ks = 0.0261)

Additional orthologs identified in other species via the OPTIC pipeline.

BT.61487 (Cow)   STX18 (Human)   Stx18 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 399 bp    Location:20938..2940   Strand:-
Raw sequence 
>bmy_11161
ATGGAAAAGATTCCGGCCGAAGCACAACCTGAATTGGGAACCTGGGGAGATGGGAAAGGTGAAGATGAATTATCCCCAGAAGAAATACAAATGTTCGAACAAGAAAATCAGCGCCTGATTGGTGAAATGAACAGCCTGTTTGACGAAGTGAGGCAGATCGAAGGGAAAGTGGTTGAAATTTCCAGACTCCAAGAGATATTCACAGAGAAGGTTTTACAACAAGAAGCTGAGATTGACAGTATTCACCAATTAGTAGTAGGAGCAACTGAGAATATCAAGGAGGGCAATGAAGACATCAGAGAGGCCATCAAGAACAACGCTGGCTTCCGCGTGTGGGTGCTCTTCTTCCTGGTGATGTGCTCCTTCTCCCTGCTCTTCCTCGACTGGTACGACAGCTAG

Related Sequences

bmy_11161T0 SequenceType object (3)

Length: 133 aa      
>bmy_11161T0
MEKIPAEAQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWVLFFLVMCSFSLLFLDWYDS*