Sequence details bmy_11161 (Coding sequence)

Part of scaffold_604 (Scaffold)

For more information consult the page for scaffold_604 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STX18  (Minke Whale)

Gene Details

syntaxin 18

External Links

Gene match (Identifier: BACU014361, Minke Whale)

Protein Percentage 98.13%
cDNA percentage 98.13%
Ka/Ks Ratio 0.62592 (Ka = 0.0164, Ks = 0.0261)

Additional orthologs identified in other species via the OPTIC pipeline.

BT.61487 (Cow)   STX18 (Human)   Stx18 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 399 bp    Location:20938..2940   Strand:-
Raw sequence 
>bmy_11161
ATGGAAAAGATTCCGGCCGAAGCACAACCTGAATTGGGAACCTGGGGAGATGGGAAAGGTGAAGATGAATTATCCCCAGAAGAAATACAAATGTTCGAACAAGAAAATCAGCGCCTGATTGGTGAAATGAACAGCCTGTTTGACGAAGTGAGGCAGATCGAAGGGAAAGTGGTTGAAATTTCCAGACTCCAAGAGATATTCACAGAGAAGGTTTTACAACAAGAAGCTGAGATTGACAGTATTCACCAATTAGTAGTAGGAGCAACTGAGAATATCAAGGAGGGCAATGAAGACATCAGAGAGGCCATCAAGAACAACGCTGGCTTCCGCGTGTGGGTGCTCTTCTTCCTGGTGATGTGCTCCTTCTCCCTGCTCTTCCTCGACTGGTACGACAGCTAG

Related Sequences

bmy_11161T0 Protein

Length: 133 aa      
>bmy_11161T0
MEKIPAEAQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWVLFFLVMCSFSLLFLDWYDS*