Part of scaffold_604 (Scaffold)

For more information consult the page for scaffold_604 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MSX1 ENSTTRG00000012158 (Bottlenosed dolphin)

Gene Details

msh homeobox 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011517, Bottlenosed dolphin)

Protein Percentage 98.65%
cDNA percentage 98.54%
Ka/Ks Ratio 0.08258 (Ka = 0.0055, Ks = 0.0664)

MSX1 ENSBTAG00000010875 (Cow)

Gene Details

homeobox protein MSX-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014447, Cow)

Protein Percentage 98.32%
cDNA percentage 95.74%
Ka/Ks Ratio 0.02855 (Ka = 0.007, Ks = 0.2461)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 894 bp    Location:387214..391188   Strand:+
>bmy_11164
ATGACTTCTTTGCCACTCGGTGTCAAAGTGGAGGACTCCGCCTTCGGCAAGCCGGCGGGGGGCGGCGGGGGCCAGACCCCCAGCACCACCGCGGCCACGGCGGCCGCCATGGGCGCAGACGAGGAGGGGGCCAAGCCCAAAGTGTCCCCTTCGCTTCTGCCCTTCAGCGTGGAGGCGCTCATGGCCGATCACAGGAAGCCCGGGGCCAAGGACAGCGTCCTGGCGGCCTCCGAGGGCGCACAGGCGGCGGGCGGCTCCGCGCAGCCTCTGGGCTCCCGGCCCGGGTCGTTGGGCGCCCCGGATGCGCCGTCCTCGCCGCGGCCGCTCGGCCATTTCTCGGTGGGAGGACTCCTCAAGCTGCCAGAAGACGCGCTCGTCAAAGCCGAGAGCCCCGAGAAGCCCGAGAGGACCCCGTGGTTGCAGAACCCCCGCTTCTCCCCGCCCCCGGCCAGGCGGCTGAGCCCCCCGGCCTGCACCCTGCGCAAGCACAAGACCAACCGCAAGCCGCGGACACCCTTCACCACAGCCCAGCTGCTGGCGCTGGAGCGCAAGTTCCGCCAGAAGCAGTACCTGTCCATCGCCGAGCGCGCCGAGTTCTCCAGCTCGCTCAGCCTCACGGAGACGCAGGTGAAGATCTGGTTTCAGAACCGCCGCGCCAAGGCCAAGAGACTGCAGGAGGCAGAGCTGGAGAAGCTGAAGATGGCCGCCAAACCCATGCTGCCCCCCGCAGCCTTCGGTCTCTCCTTCCCCCTCGGCGGCCCCGCGGCCGTAGCGGCCGCCGCGGGCGCCTCGCTCTACGGTGCCTCTAGCCCCTTCCAGCGCGCCGCGCTGCCTGTGGCGCCCGTGGGACTCTACACAGCCCACGTAGGCTACAGCATGTACCACCTGACATAG

Related Sequences

bmy_11164T0 Protein

Length: 298 aa      View alignments
>bmy_11164T0
MTSLPLGVKVEDSAFGKPAGGGGGQTPSTTAATAAAMGADEEGAKPKVSPSLLPFSVEALMADHRKPGAKDSVLAASEGAQAAGGSAQPLGSRPGSLGAPDAPSSPRPLGHFSVGGLLKLPEDALVKAESPEKPERTPWLQNPRFSPPPARRLSPPACTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAAFGLSFPLGGPAAVAAAAGASLYGASSPFQRAALPVAPVGLYTAHVGYSMYHLT*