Sequence detailsbmy_11190 (Coding sequence)

Part of scaffold_619 (SequenceType object (1))

For more information consult the page for scaffold_619 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NPATENSTTRG00000006061 (Bottlenosed dolphin)

Gene Details

nuclear protein, ataxia-telangiectasia locus

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005731, Bottlenosed dolphin)

Protein Percentage 96.43%
cDNA percentage 98.21%
Ka/Ks Ratio 0.71523 (Ka = 0.0169, Ks = 0.0237)

NPATENSBTAG00000010286 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013589, Cow)

Protein Percentage 90.42%
cDNA percentage 93.76%
Ka/Ks Ratio 0.34705 (Ka = 0.0472, Ks = 0.136)

Additional orthologs identified in other species via the OPTIC pipeline.

NPAT (Human)   Npat (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 4335 bp    Location:795678..850032   Strand:+
Raw sequence 
>bmy_11190
ATGCTGTTACCTTCGGACGTAGCCCGACTGGTATTGGGTTACTTACAACAAGAGAACCTTACTTCTACCTGCCAGGCTTTTATTTTGGAAAGTTCAAATTTAAAAGAATATGCAGAACACTGTACAGATGAAGGTTTTATCCCAGCCTGCTTACTGTCTTTATTTGGAAAAAATTTGACAACAATTTTGAATGAATATGTAGCTATGAAAGCAAAAGAAACATCAAATGATGTCCCAGCAATTTTGTCATCTCTGTGGAAGAAGTTAGACCATACACTTTCTCAGATCAGGAGCATGCAAAGTTCCCCAGGGTTTGCTGCCAATCAGAGAGCCCGAACAAGAAGTGGAATTGCAGAAATCAAACGGCAGAGAAGGCTTGCATCTCAAGCAGCTCCTGTCAGTTCAGAGTTGCTGACTTTACCGTATCTTTCAGGGCAATTTACTAATTCTCCTTTGACAGCTACACAAGTTATTCGGCCAGCTGGCCAGATTTCAACTCCTTTGAGGTCAAATTTTGTAGTGGTCAACCATTCACAGTCACAAGACACTATGACCCCTGGAGAGGCTTTCAATATCATTCCTGGTCCTCAGGAAAGGAAAACTCATGCCAGTTTAATGTCTCCTGGTAGACGCAAAAGTGAATCTCAAAGGAAAAGTATCACTTTGTCTGGGCCTCATTCAACAATACGGAATTTCCAGGATCCAAATACATTTGCAGTAGAAAAACAAATGGTTATTGAAAATGCTCGAGAAAAAATATTAAGCAACAAATCTCTTCAAGAAAAGCTTGCAGAAAACATTAATAAATTTTTGACTAGTGACAACAATATTGCTCAAGTACCTAAGCAAACAGATAGCAACCCTAGTGAACCAGAGACTTCAATTGATGAACTCCTGGGACTTCAGAGTGAAATCCACATGTCTGAAGAAGCTATACAGGATATATTGGAACAGACAGAATCCGATCCAGCATTTCAGGCACTCTTTGATCTATTTGACTATGGTAAAACAAAGAATAATAAAAATATATCACAAGGCATTTCCAGTCAGCATATGGAAACCAATCTCAATGTAGTCTTAGCAGGTGAAACTAATCTAGCAGTTAGAGGTTCTTTTGAAACAGAAGTATCTGATGATCAATCTGGTCAACCCCCATTTTGTACATCCTATCAAAATGAAGACACATCAAATGTTTTGAAGAATGGCAGCAACCATGATGAGCTTAGACAGGAAGCCCAGGAACAGTTTTCCCAGATAGACTCTAGCGTCCAGAAAAAGGCCTTTAAAACAGTAGTATCTACTGAACAGAAGTGTAACCTTGATATCACCTTTGAGTCTGTGCCTAATTTGAATGACTTTAACCAAAGAATAAACTCTGATGCCGAATGTAATCAGCATTGTGCTGAATTATACACCAATCAGATGTCTACTGAAACTGACTTGGCTATGGAAGTTGAAAAGAATTCTTTGTCTCCAAGTGTGCAGAATGAATCTCGATTACAGCCTGATCAGTCTGATATACCAATAACTTCATTTGTTTCCCTTGGTGGTGAAACTAACAATGAGAACTTAATTCTCTCTGGAAAAACTTCTCAGCTTTTATCCCAAAATATTCCATTAACTGGAAAGCCATCTAAAAAAGGTCAATTTTGTGAAAGTTCTGACGATACAAGAAGACTTACAACTAATTTCCATGGTTCCAAGTCACCGGATTCTAGAGAAATTTATCAGAGTAAAATTGAAATTAATAATGTGTTACCAGTTGCATCACAGCAACTTTCAGATTGCCAAGATAATTCTTCACTTCAAAGTAAAATATTACCTGTGTCTATTGAAGGTTCGGGTTTAACTGTATCTGAACAAAAAGTAGAAATTCACCTTGGAGATTCAGTATCTTCAATTAAACAACCATCTAATGATTCATCATCTGTTGAGTTAAATCATACAGATCATGAACCTCAGCCCTCCAAGTCTGAGAAAGTTGCTTTGGGTTCACAAGAGCCTTCATCTTCTGTAAAAGAAGATGGAGATAGTATTTTTCTCTCTTTAGGTGAAAATAACTGTGAGGAAGTTACATTGATACCCCCAGAAGCTAATCCTATAGAAGATATACATTCTCTTCCTTCAGAATCTGTGTGTTCTTCAATGAGGGATTCTCACCCTGAGTCCCAGAACACTAGTGATAAACCTGCTGGCAACAAGTCAACAGAGATAGATGCATCAAATATAGTCTCTCTCAAAATTATCATCAGTGATGATCCATTTGTTTCCTCAGATTCTGAACTTAACAGTGCTGTTTCTAGTATCAGTGGAGAAAACTTGCCAACTATAATTTTGTCTTCTCCTGCTAAATCACCTGCCAGAAATGCAGAAGTAGTTAAATGCCTGTCTTCAGAAGAAACCACAGGTGCTGTCTCATCTGCTGAAGGAATTGGGGATTCAGCCTCAATGGAACAGAGCCTTTTAGCATTCAAACCTGAAGACTCTACAATAAACAACACTCAGAATGAAGACAGCATTGCTTTTTCAGCCAATGTTACACCATGTGTTTCCAAGGATGGAGGATACATACAGTTAATGCCAGCTACAAGCACAACTTTTGGCAATTCAAATAACATTCTGATAGCTACTTGTGTAACTGATCCAACAGCCTTAGGAGCAACTGTCAGTCAGTCAAATGTGGTGGTGTTGCCTGGAAATTCTGCACCTATGACTGCTCAACCACCACCTCAGTTACAGACACCCCCAAGGTCAAACAGTGTATTTGCTGTCAACCAAGCTATGTCACCCAACTTTTCACAAGGATCTGCCATTATAATTGCTTCTCCAGTCCAACCTGTACTTCAGGGAATGGTGGGAATGATCCCTGTATCTGTGGTTGGACAGAATGGAAATACCTTTTCTGCTCCTCCTCGGCAGGTCCTTCATATGCCTTTGGCAGCACCTGTTTGCAATAGAAGTATCCCTCAATTCCCTATCCCTCCAAAATCTCTGAAGACTCAGGGACTAAGAAACAAGCCTTGTACAGGAAAACAGGTAAATAATTTGGTGGATTCATCAAGTCACTTAGTTGGATGTCATGTACAACGAACTGAAGTTCCTGACAAGAATATGGCCACAGATCTTGGGAAAAAATTGGAAGAAATAACAGTTCCCCTCTCAGTAGAAAGTATAGTTCCAACTAGCAAAACCTTTGAAAGCCACAGACGTGTGCTCTGTTTTGATAGCACTGCTTCTCCTGTGGCGAATACACAGGGGACAAATCATAAGACGGTGTCCCAAAACAAAGAAAGGAATGACATTTCATTTTCTAATCTTGACTCACCCATTGTTTCCTCCACCTTAAAACCCCCTTCTAATAATGCTCTCAAAAGAGAGAGAGAGAAACCTCCTGTGCCTAAGATTTTATCTAAATCAGAAACTGCCATTAGCCGACATACCATAAAAGAAACTCAGTCAGAAAAGAAAGTTTCASCAACAGAAACTATACTTGAATCTTTCCATAAAACAACAGCTAATAAGGAGAATGAACTATGCAGTGATGTGGAAAGGCAGAAAAATCCAGAAACTTCAAAACTGTCTAATGGGCAGCAAAATGCGGGTGTACGGAATGAGAAAACTGTAGTTTCACTGCAAGAGCTAACCAGAAAACAAGGCACATCCTCAAACAGTAAAAATGTCATTTCAGTAGGTGCACCTGTGAAGGATTTAAAACAAGAACAAACCAAGTCTGCCAGTTCTTTGATTAACCCACTCACCAAACATACCACAGAAATGTTACAAGATATTCAGTGGCATAGCCCAGTAAGTAGACTCGCTGATAGTACTGATTTATCTGTACCCCGGACTTCTGGCTCAGGAGCAGGGGAAAAACATAAAGAAGAACCTACAGATGTTATCAAGGTCCCTTCTAGTAGGCGTTACGGTGAAGACAGTAGCACAGCCAAAGTAATGGTCCCTCCTGTCACCCCAGACTTGCCCGCCTGCAGCCCTGCCAGTGAAACAGGGAGTGAAAACAGTGTAAACATGGCTGCCCATACATTAATGATTCTCTCCAGAGCAGCCATCTCTAGGACTACTTCAACTACTCCTCTAAAAGACAATACACAGCAATTTAGAGCCTCTTCAAGGAGTACCACAAAAAAGCGGAAAATCGAGGAATTAGATGAGCGTGAACGACACTCCCGTACTTCTAATAAAAGTCTTGCAAATTCATCAATACCAATGAAAAAGAAGAAAATTAAGGCAAGTTTGAAAAAAAAGAAGCTACCCAGTTCATTTCCAGCTGGAATGGATGTGGACAAATTTTTGTTATCATTGCATTATGATGAGTAA

Related Sequences

bmy_11190T0 SequenceType object (3)

Length: 1445 aa      View alignments
>bmy_11190T0
MLLPSDVARLVLGYLQQENLTSTCQAFILESSNLKEYAEHCTDEGFIPACLLSLFGKNLTTILNEYVAMKAKETSNDVPAILSSLWKKLDHTLSQIRSMQSSPGFAANQRARTRSGIAEIKRQRRLASQAAPVSSELLTLPYLSGQFTNSPLTATQVIRPAGQISTPLRSNFVVVNHSQSQDTMTPGEAFNIIPGPQERKTHASLMSPGRRKSESQRKSITLSGPHSTIRNFQDPNTFAVEKQMVIENAREKILSNKSLQEKLAENINKFLTSDNNIAQVPKQTDSNPSEPETSIDELLGLQSEIHMSEEAIQDILEQTESDPAFQALFDLFDYGKTKNNKNISQGISSQHMETNLNVVLAGETNLAVRGSFETEVSDDQSGQPPFCTSYQNEDTSNVLKNGSNHDELRQEAQEQFSQIDSSVQKKAFKTVVSTEQKCNLDITFESVPNLNDFNQRINSDAECNQHCAELYTNQMSTETDLAMEVEKNSLSPSVQNESRLQPDQSDIPITSFVSLGGETNNENLILSGKTSQLLSQNIPLTGKPSKKGQFCESSDDTRRLTTNFHGSKSPDSREIYQSKIEINNVLPVASQQLSDCQDNSSLQSKILPVSIEGSGLTVSEQKVEIHLGDSVSSIKQPSNDSSSVELNHTDHEPQPSKSEKVALGSQEPSSSVKEDGDSIFLSLGENNCEEVTLIPPEANPIEDIHSLPSESVCSSMRDSHPESQNTSDKPAGNKSTEIDASNIVSLKIIISDDPFVSSDSELNSAVSSISGENLPTIILSSPAKSPARNAEVVKCLSSEETTGAVSSAEGIGDSASMEQSLLAFKPEDSTINNTQNEDSIAFSANVTPCVSKDGGYIQLMPATSTTFGNSNNILIATCVTDPTALGATVSQSNVVVLPGNSAPMTAQPPPQLQTPPRSNSVFAVNQAMSPNFSQGSAIIIASPVQPVLQGMVGMIPVSVVGQNGNTFSAPPRQVLHMPLAAPVCNRSIPQFPIPPKSLKTQGLRNKPCTGKQVNNLVDSSSHLVGCHVQRTEVPDKNMATDLGKKLEEITVPLSVESIVPTSKTFESHRRVLCFDSTASPVANTQGTNHKTVSQNKERNDISFSNLDSPIVSSTLKPPSNNALKREREKPPVPKILSKSETAISRHTIKETQSEKKVSXTETILESFHKTTANKENELCSDVERQKNPETSKLSNGQQNAGVRNEKTVVSLQELTRKQGTSSNSKNVISVGAPVKDLKQEQTKSASSLINPLTKHTTEMLQDIQWHSPVSRLADSTDLSVPRTSGSGAGEKHKEEPTDVIKVPSSRRYGEDSSTAKVMVPPVTPDLPACSPASETGSENSVNMAAHTLMILSRAAISRTTSTTPLKDNTQQFRASSRSTTKKRKIEELDERERHSRTSNKSLANSSIPMKKKKIKASLKKKKLPSSFPAGMDVDKFLLSLHYDE*