Part of scaffold_611 (Scaffold)

For more information consult the page for scaffold_611 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GPX3 ENSBTAG00000043553 (Cow)

Gene Details

Glutathione peroxidase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053146, Cow)

Protein Percentage 72.41%
cDNA percentage 76.03%
Ka/Ks Ratio 0.17459 (Ka = 0.18, Ks = 1.0307)

GPX3  (Minke Whale)

Gene Details

glutathione peroxidase 3 (plasma)

External Links

Gene match (Identifier: BACU013101, Minke Whale)

Protein Percentage 62.12%
cDNA percentage 67.34%
Ka/Ks Ratio 0.20343 (Ka = 0.2925, Ks = 1.4378)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 744 bp    Location:669347..660139   Strand:-
>bmy_11236
ATGCTGCTCTGCGATTGGAGAGCGCATCTTCAAACTGGTCTGTGCCAGGGGCTCAAAAGGAGCCGAGATCCCTGGGGACCTGAGGCTCGCCTAGAACTCCTAGTCCGAGCCATGATCCCGCAGTTCTGGGCCTGCTGTCTTTTCTCACTGTTCCTGGTCGGCTTCGCTCAGCCGACCCCGAAACAGCAACAGATGAAGGTGGATTGCTATAAGGGGGTGACAGGCACCATCTATGAGTATGGAGCCCTCACCCTCAATGGCGAGGAGTATATCCAGKTCAAGCAGTATGCGGGCAAGCATGTCCTCTTTGTCAATGAGGAGCTGAAGCCTTTTGGTGTAGTTGTGTTGGGCTTTCCCTGCAACCAATTTGGAAAACAAGAACCAGCAAAAAACTCAGAGATCCTTTTGGGGCTCAAGAACACTCTGGTTCATTGCAGGTATGTACGTCCAGGTGGTGGCTTTGTTCCCAATTTTCAGCTCTTTGAGAAAGGGGATGTGAATGGAGAAAAAGAACAGAAGGTCTTTAGCTTCCTGAAGAACTCCTGCCCTCCAACCTCTGATTTTTTGGGCTCATCAAGCCAACTCTTCTGGGAGCCCATGAAGGTCCATGACATCCGCTGGAACTTTGAGAAGTTCCTGGTGGGGCCTGATGGAGTCCCTATCATGCGCTGGTTCCACCGGGCTTCCATCAGCACAGTCAAGTCAGACATCCTGGAGTACATGAAGCAGTTCAAAAGCAAATAG

Related Sequences

bmy_11236T0 Protein

Length: 248 aa     
>bmy_11236T0
MLLCDWRAHLQTGLCQGLKRSRDPWGPEARLELLVRAMIPQFWACCLFSLFLVGFAQPTPKQQQMKVDCYKGVTGTIYEYGALTLNGEEYIQXKQYAGKHVLFVNEELKPFGVVVLGFPCNQFGKQEPAKNSEILLGLKNTLVHCRYVRPGGGFVPNFQLFEKGDVNGEKEQKVFSFLKNSCPPTSDFLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPIMRWFHRASISTVKSDILEYMKQFKSK*