Part of scaffold_611 (Scaffold)

For more information consult the page for scaffold_611 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM27 ENSTTRG00000008495 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 27

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008042, Bottlenosed dolphin)

Protein Percentage 99.73%
cDNA percentage 99.2%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.03)

TRIM27 ENSBTAG00000000871 (Cow)

Gene Details

zinc finger protein RFP

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001158, Cow)

Protein Percentage 99.61%
cDNA percentage 97.53%
Ka/Ks Ratio 0.00721 (Ka = 0.0008, Ks = 0.117)

TRIM27  (Minke Whale)

Gene Details

tripartite motif containing 27

External Links

Gene match (Identifier: BACU007847, Minke Whale)

Protein Percentage 99.61%
cDNA percentage 99.54%
Ka/Ks Ratio 0.05293 (Ka = 0.0008, Ks = 0.0159)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1779 bp    Location:908906..892753   Strand:-
>bmy_11238
CGCTGGGCTAGGTGGGGTCGCAATATCCCCACGCTCCCTCAGCCGGGCGCAGCGGCGCCGGGTTCCAGCGCGCGGGCGCGTCTGGGATCAGGGCCGGGGAGGAGCCGCCCTCCGTCAGCCGGGCTCGCCTCCCGGCGCCGCCCAGAAGCAGCGAACGGGAGGGAGCGCGGTACAGCTGGGCTCCGCGCAGGGCTGGGCGCCGGGGCCCATGCCCGTGCGCCCCCGCGGGCCCGCGCCATGGCCTCCGGGAGCGTGGCCGAGTGCTTACAGCAGGAGACCACCTGCCCCGTGTGCCTGCAGTACTTTGTCGAGCCCATGATGCTCGACTGCGGCCACAACATCTGTTGCGCCTGCCTCGCCCGCTGCTGGGGCGCGGCGGAGACCAATGTGTCGTGCCCCCAGTGCCGGGAGACCTTCCCGCAGCGGCACATGCGGCCCAACCGGCACCTGGCCAACGTGACCCAGCTGGTGAAGCAGTTGCGCACCGAGCGGCCGTCGGGGCCCGGAGGCGAGATGGGCGTGTGCGAGAAACACCGCGAGCCCCTGAAGCTGTACTGCGAGGAGGACCAGATGCCCATCTGCGTGGTGTGCGACCGCTCCCGCGAGCACCGCGGCCACAGCGTGCTGCCGCTCGAGGAGGCGGTGGAGGGCTTCAAGGAGCAAATCCAGAACCAGCTGGACCACCTAARAAGAGTGAAAGACTTAAAGAAGAGGCGTCGGGCACAGGGGGAACAGGCACGAGCTGAGCTCTTGAGCCTGACCCAGATGGAGAGGGAGAAGATCGTTTGGGAGTTTGAGCAGCTGTATCATTCCTTGAAGGAGCATGAGTATCGCCTCCTGGCCCGTCTCGAGGAGCTAGACTTGGCCATCTACAACAGTATCAATGGTGCCATCACTCAGTTCTCTTGCAACATCTCCCACCTCAGCAACCTGATCGCCCAGCTGGAAGAGAAGCAGCAGCAGCCCACGAGGGAGCTCCTGCAGGACATCGGAGACACGTTGAACAGGGCTGAAAGAATCAGGATCCCTGAACCCTGGATCACACCTCCAGATCTGCAAGAGAAAATCCACATTTTTGCCCAGAAGTGTCTGTTCTTGACTGAGAGTCTAAAGCAGTTCACAGAAAAAATGCAGTCAGATATGGAGAAAATCCAAGAATTGAGAGAGGCCCAGTTATACTCAGTGGATGTGACTCTGGATCCAGACACGGCCTACCCCAGCCTGATCCTCTCTGATAACCTGCGGCAAGTGCGGTACAGTTACCTCCAGCAGGACCTGCCTGACAACCCTGAGCGGTTCAATCTGTTTCCCTGTGTCTTGGGCTCTCCATGCTTCATCGCTGGGAGACATTATTGGGAGGTAGAGGTGGGAGATAAAGCCAAGTGGACCATAGGTGTCTGTGAAGACTCAGTGTGCAGAAAAGGCGGAGTAACCTCGGCCCCCCAGAATGGATTCTGGGCAGTGTCCTTGTGGTATGGGAAAGAGTACTGGGCTCTAACCTCCCCAATGACTGCCCTTCCCCTACGGACCCCTCTCCAACGGGTGGGGATTTTCTTGGACTATGATGCTGGCGAGGTCTCCTTCTACAACGTGACAGAGAGGTGTCACACCTTTACTTTCTCTCATGCTACCTTCTGTGGGCCTGTCCGGCCCTACTTCAGTCTGAGTTACTCGGGAGGGAAGAGCGCAGCTCCTCTGATCATCTGCCCCATGAGTGGGATCGATGGGTTTTCTGGCCATGTTGGGAATCATGGTCATTCCATGGAGACCTCCCCTTGA

Related Sequences

bmy_11238T0 Protein

Length: 593 aa      View alignments
>bmy_11238T0
RWARWGRNIPTLPQPGAAAPGSSARARLGSGPGRSRPPSAGLASRRRPEAANGRERGTAGLRAGLGAGAHARAPPRARAMASGSVAECLQQETTCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETFPQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDRSREHRGHSVLPLEEAVEGFKEQIQNQLDHLXRVKDLKKRRRAQGEQARAELLSLTQMEREKIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSNLIAQLEEKQQQPTRELLQDIGDTLNRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQSDMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCVLGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWALTSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSGGKSAAPLIICPMSGIDGFSGHVGNHGHSMETSP*