Part of scaffold_611 (SequenceType object (1))

For more information consult the page for scaffold_611 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM27ENSTTRG00000008495 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 27

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008042, Bottlenosed dolphin)

Protein Percentage 99.73%
cDNA percentage 99.2%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.03)

TRIM27ENSBTAG00000000871 (Cow)

Gene Details

zinc finger protein RFP

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001158, Cow)

Protein Percentage 99.61%
cDNA percentage 97.53%
Ka/Ks Ratio 0.00721 (Ka = 0.0008, Ks = 0.117)

TRIM27 (Minke Whale)

Gene Details

tripartite motif containing 27

External Links

Gene match (Identifier: BACU007847, Minke Whale)

Protein Percentage 99.61%
cDNA percentage 99.54%
Ka/Ks Ratio 0.05293 (Ka = 0.0008, Ks = 0.0159)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1779 bp    Location:908906..892753   Strand:-
>bmy_11238
CGCTGGGCTAGGTGGGGTCGCAATATCCCCACGCTCCCTCAGCCGGGCGCAGCGGCGCCGGGTTCCAGCGCGCGGGCGCGTCTGGGATCAGGGCCGGGGAGGAGCCGCCCTCCGTCAGCCGGGCTCGCCTCCCGGCGCCGCCCAGAAGCAGCGAACGGGAGGGAGCGCGGTACAGCTGGGCTCCGCGCAGGGCTGGGCGCCGGGGCCCATGCCCGTGCGCCCCCGCGGGCCCGCGCCATGGCCTCCGGGAGCGTGGCCGAGTGCTTACAGCAGGAGACCACCTGCCCCGTGTGCCTGCAGTACTTTGTCGAGCCCATGATGCTCGACTGCGGCCACAACATCTGTTGCGCCTGCCTCGCCCGCTGCTGGGGCGCGGCGGAGACCAATGTGTCGTGCCCCCAGTGCCGGGAGACCTTCCCGCAGCGGCACATGCGGCCCAACCGGCACCTGGCCAACGTGACCCAGCTGGTGAAGCAGTTGCGCACCGAGCGGCCGTCGGGGCCCGGAGGCGAGATGGGCGTGTGCGAGAAACACCGCGAGCCCCTGAAGCTGTACTGCGAGGAGGACCAGATGCCCATCTGCGTGGTGTGCGACCGCTCCCGCGAGCACCGCGGCCACAGCGTGCTGCCGCTCGAGGAGGCGGTGGAGGGCTTCAAGGAGCAAATCCAGAACCAGCTGGACCACCTAARAAGAGTGAAAGACTTAAAGAAGAGGCGTCGGGCACAGGGGGAACAGGCACGAGCTGAGCTCTTGAGCCTGACCCAGATGGAGAGGGAGAAGATCGTTTGGGAGTTTGAGCAGCTGTATCATTCCTTGAAGGAGCATGAGTATCGCCTCCTGGCCCGTCTCGAGGAGCTAGACTTGGCCATCTACAACAGTATCAATGGTGCCATCACTCAGTTCTCTTGCAACATCTCCCACCTCAGCAACCTGATCGCCCAGCTGGAAGAGAAGCAGCAGCAGCCCACGAGGGAGCTCCTGCAGGACATCGGAGACACGTTGAACAGGGCTGAAAGAATCAGGATCCCTGAACCCTGGATCACACCTCCAGATCTGCAAGAGAAAATCCACATTTTTGCCCAGAAGTGTCTGTTCTTGACTGAGAGTCTAAAGCAGTTCACAGAAAAAATGCAGTCAGATATGGAGAAAATCCAAGAATTGAGAGAGGCCCAGTTATACTCAGTGGATGTGACTCTGGATCCAGACACGGCCTACCCCAGCCTGATCCTCTCTGATAACCTGCGGCAAGTGCGGTACAGTTACCTCCAGCAGGACCTGCCTGACAACCCTGAGCGGTTCAATCTGTTTCCCTGTGTCTTGGGCTCTCCATGCTTCATCGCTGGGAGACATTATTGGGAGGTAGAGGTGGGAGATAAAGCCAAGTGGACCATAGGTGTCTGTGAAGACTCAGTGTGCAGAAAAGGCGGAGTAACCTCGGCCCCCCAGAATGGATTCTGGGCAGTGTCCTTGTGGTATGGGAAAGAGTACTGGGCTCTAACCTCCCCAATGACTGCCCTTCCCCTACGGACCCCTCTCCAACGGGTGGGGATTTTCTTGGACTATGATGCTGGCGAGGTCTCCTTCTACAACGTGACAGAGAGGTGTCACACCTTTACTTTCTCTCATGCTACCTTCTGTGGGCCTGTCCGGCCCTACTTCAGTCTGAGTTACTCGGGAGGGAAGAGCGCAGCTCCTCTGATCATCTGCCCCATGAGTGGGATCGATGGGTTTTCTGGCCATGTTGGGAATCATGGTCATTCCATGGAGACCTCCCCTTGA

Related Sequences

bmy_11238T0 SequenceType object (3)

Length: 593 aa      View alignments
>bmy_11238T0
RWARWGRNIPTLPQPGAAAPGSSARARLGSGPGRSRPPSAGLASRRRPEAANGRERGTAGLRAGLGAGAHARAPPRARAMASGSVAECLQQETTCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETFPQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDRSREHRGHSVLPLEEAVEGFKEQIQNQLDHLXRVKDLKKRRRAQGEQARAELLSLTQMEREKIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSNLIAQLEEKQQQPTRELLQDIGDTLNRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQSDMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCVLGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWALTSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSGGKSAAPLIICPMSGIDGFSGHVGNHGHSMETSP*