Part of scaffold_603 (Scaffold)

For more information consult the page for scaffold_603 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMC4 ENSTTRG00000000770 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000725, Bottlenosed dolphin)

Protein Percentage 98.01%
cDNA percentage 98.01%
Ka/Ks Ratio 0.11469 (Ka = 0.0071, Ks = 0.0618)

BT.48909 ENSBTAG00000009414 (Cow)

Gene Details

26S protease regulatory subunit 6B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012391, Cow)

Protein Percentage 99.15%
cDNA percentage 95.45%
Ka/Ks Ratio 0.02394 (Ka = 0.0051, Ks = 0.2112)

PSMC4  (Minke Whale)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 4

External Links

Gene match (Identifier: BACU008297, Minke Whale)

Protein Percentage 99.15%
cDNA percentage 98.87%
Ka/Ks Ratio 0.1199 (Ka = 0.0048, Ks = 0.0399)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1062 bp    Location:166321..180534   Strand:+
>bmy_11273
ATGAGCCCGGATGAGATCCCAGCCCTGTCTGTGTCACGGCCCCAGACTGGCCTGTCCTTCCTGGGGCCTGAGCCTGAGGACCTGGAGGACCTGTACAGCCGCTACAAGAAGCTGCAGCAAGAGCTGGAGTTCCTGGAGGTGCAGGAGGAGTACATCAAGGATGAGCAAAAGAACCTGAAGAAGGAATTCCTCCACGCCCAGGAGGAGGTGAAGCGAATCCAGAGCATCCCACTGGTTATTGGGCAGTTTCTGGAGGCTGTGGATCAGAATACAGCCATCGTGGGCTCCACCACAGGCTCCAACTACTATGTGCGCATCCTGAGCACCATCGACCGGGAGCTGCTCAAGCCCAACGCCTCGGTGGCCCTCCACAAGCACAGCAACGCCCTGGTGGATGTGCTGCCTCCTGAGGCCGACAGCAGCATCATGATGCTCACCTCAGATCAGAAGCCAGACGTCATGTACGCGGACATTGGGGGCATGGACATCCAGAAGCAGGAGGTGCGGGAGGCCGTGGAGCTCCCCCTTACGCACTTTGAGCTCTACAAGCAGATCGGCATCGACCCTCCCCGAGGCGTCCTCATGTATGGCCCGCCCGGCTGCGGGAAGACCATGTTGGCAAAGGCTGTGGCTCATCACACGACAGCTGACAGGGAGGTTCAGAGAATCCTGCTGGAGCTACTGAATCAAATGGATGGATTCGACCAGAACGTCAATGTCAAGGTGATCATGGCCACAAACAGAGCAGACACCCTGGATCCTGCTCTGCTGCGGCCGGGACGCCTTGACCGTAAAATTGAATTTCCACTCCCTGACCGCCGCCAGAAGAGATTGATTTTCTCCACTATCACCAGCAAGATGAACCTCTCTGAGGAGGTTGACTTGGAAGATTATGTGGCCCGACCAGATAAGATTTCAGGAGCTGATATCAACTCCATCTGTCAGGAGAGCGGCATGTTGGCTGTCCGAGAGAACCGCTACATTGTTCTGGCCAAGGACTTCGAGAAAGCGTACAAGACAGTCATCAAGAAGGACGAACAGGAGCATGAGTTTTACAAGTGA

Related Sequences

bmy_11273T0 Protein

Length: 354 aa      View alignments
>bmy_11273T0
MSPDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK*