Part of scaffold_603 (Scaffold)

For more information consult the page for scaffold_603 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TGFB1 ENSTTRG00000012848 (Bottlenosed dolphin)

Gene Details

transforming growth factor, beta 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012180, Bottlenosed dolphin)

Protein Percentage 99.34%
cDNA percentage 99.02%
Ka/Ks Ratio 0.07391 (Ka = 0.0028, Ks = 0.0381)

TGFB1 ENSBTAG00000020457 (Cow)

Gene Details

transforming growth factor beta-1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027261, Cow)

Protein Percentage 95.19%
cDNA percentage 94.66%
Ka/Ks Ratio 0.1314 (Ka = 0.0253, Ks = 0.1924)

TGFB1  (Minke Whale)

Gene Details

transforming growth factor, beta 1

External Links

Gene match (Identifier: BACU002047, Minke Whale)

Protein Percentage 97.48%
cDNA percentage 97.48%
Ka/Ks Ratio 0.17916 (Ka = 0.0141, Ks = 0.0788)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 948 bp    Location:969738..957150   Strand:-
>bmy_11309
ATGCCGCCCTCGGGGCTGCGGCTGCTGCCGCTGCTGCTGCCGCTGCTGTGGCTACTAGTGCTGCCGCCTAGCCGGCCGGCCGCCGGACTGTCCACCTGCAAGACCATCGACATGGAGCTGGTGAAGCGAAAGCGCATCGAGGCCATCCGCGGCCAGATTCTGTCCAAGCTTCGGCTCGCCAGCCCCCCGAGCCAGGGGGAGGTGCCGCCCGGTCCGCTGCCCGAGGCCGTACTGGCCCTTTACAACAGTACCCGTGACCGGGTGGCCGGGGAAAGTGCCGAACCTGAGCCTGAGCCAGAGGCGGACTACTACGCCAAGGAGGTCACCCGCGTGCTAATGGTGGAAAACAGCAACGCGGTGCCCGAACCTGTGTTGCTCTCTCGGGCAGAGCTGCGCCTGCTGAGGCTCAAGCTAAAAGTGGAGCAGCACGTGGAGCTGTACCAGAAATACAGCAATGATTCCTGGCGCTACCTCAGCAACCGGCTGCTGGCCCCCAGCGACTCACCGGAGTGGCTGTCCTTTGATGTCACTGGAGTTGAAATAGAGGGCTTTCGCCTCAGTGCCCACTGTTCCTGTGACAGCAAAGATAACACACTCCAAGTGGACATTAACGGGTTCAGTTCCGGCCGCCGGGGTGACCTTGCCACCATTCATGGCATGAACCGGCCCTTCCTGCTCCTCATGGCCACCCCGCTGGAGAGGGCCCAGCACCTGCACAGCTCCCGGCACCGCCGAGCCCTGGACACCAACTACTGCTTCAGCTCCACGGAAAAGAACTGCTGCGTTCGGCAGCTCTACATTGACTTCCGCAAGGACCTGGGCTGGAAGTGGATTCACGAACCCAAGGGCTACCACGCCAATTTCTGCCTGGGGCCCTGCCCCTACATCTGGAGCCTGGACACGCAGTACAGCAAGGTGCGTCTGGAGCCCTGGCTGGGGGTGGGATGA

Related Sequences

bmy_11309T0 Protein

Length: 316 aa      View alignments
>bmy_11309T0
MPPSGLRLLPLLLPLLWLLVLPPSRPAAGLSTCKTIDMELVKRKRIEAIRGQILSKLRLASPPSQGEVPPGPLPEAVLALYNSTRDRVAGESAEPEPEPEADYYAKEVTRVLMVENSNAVPEPVLLSRAELRLLRLKLKVEQHVELYQKYSNDSWRYLSNRLLAPSDSPEWLSFDVTGVEIEGFRLSAHCSCDSKDNTLQVDINGFSSGRRGDLATIHGMNRPFLLLMATPLERAQHLHSSRHRRALDTNYCFSSTEKNCCVRQLYIDFRKDLGWKWIHEPKGYHANFCLGPCPYIWSLDTQYSKVRLEPWLGVG*