Part of scaffold_603 (Scaffold)

For more information consult the page for scaffold_603 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

EXOSC5 ENSTTRG00000012863 (Bottlenosed dolphin)

Gene Details

exosome component 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012199, Bottlenosed dolphin)

Protein Percentage 95.28%
cDNA percentage 95.6%
Ka/Ks Ratio 0.35137 (Ka = 0.0313, Ks = 0.0892)

EXOSC5 ENSBTAG00000016034 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021338, Cow)

Protein Percentage 91.04%
cDNA percentage 88.99%
Ka/Ks Ratio 0.13533 (Ka = 0.0516, Ks = 0.3813)

EXOSC5  (Minke Whale)

Gene Details

exosome component 5

External Links

Gene match (Identifier: BACU002050, Minke Whale)

Protein Percentage 96.7%
cDNA percentage 96.38%
Ka/Ks Ratio 0.25651 (Ka = 0.022, Ks = 0.0856)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 639 bp    Location:1001034..993006   Strand:-
>bmy_11312
ATGGAGGGGACGATGCAGACTGAGACTAAGATCCGCGCTGAGTCTGGAATAGAGTCTGGCTCTCGGGGCCCCAGTTGTAGCCTCCGGCACTTTGCCTGCGAACAGAATTTGTTGTCCCGGCCCGATGGCTCGGCCTCTTTCCTGCAAGGGGATACCTCCGTCCTGGCAGGCGTGTATGGGCCAGCAGAAGTGAAAGTCAGCAAAGAGATCTTCAACAAGGCCACACTGGAGGTGACCCTGAGGCCGAAGATCGGTCTGCCTGGCGTAGCGGAGAAGAGCCGGGAGCGGCTGATCAGAAACACGTGTGAAGCAGTGGTGCTGGGAGCTCTGCACCCCCGCACCTCCATAACCGTGGTGCTGCAGGTCGTCAGCGATGCTGGCTCTCTCCTGGCCTGTTGCCTGAATGCCGCCTGCATGGCACTGGTGGACGCAGGTGTGCCCATGCGGGCCCTCTTCTGTGGGGTCACCTGTGCTCTGGACTCTGATGGGACCCTCCTGCTGGACCCCACAGCCAAGCAAGAAAAGGAGGCCCGGGCAGTCCTGACCTTTGCACTTGACAGTGTGGAACGGAAGCTGCTGATGTCCACCACCAAGGGGCTCTACTCTGATGCTGAGGTACCAGTGTGCAGTTGGGGGTGA

Related Sequences

bmy_11312T0 Protein

Length: 213 aa      View alignments
>bmy_11312T0
MEGTMQTETKIRAESGIESGSRGPSCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVTLRPKIGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGTLLLDPTAKQEKEARAVLTFALDSVERKLLMSTTKGLYSDAEVPVCSWG*