Part of scaffold_612 (Scaffold)

For more information consult the page for scaffold_612 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRFN2 ENSTTRG00000013389 (Bottlenosed dolphin)

Gene Details

leucine rich repeat and fibronectin type III domain containing 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012703, Bottlenosed dolphin)

Protein Percentage 79.87%
cDNA percentage 79.73%
Ka/Ks Ratio 0.05487 (Ka = 0.0033, Ks = 0.06)

LRFN2 ENSBTAG00000017971 (Cow)

Gene Details

leucine-rich repeat and fibronectin type-III domain-containing protein 2 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023907, Cow)

Protein Percentage 98.5%
cDNA percentage 94.15%
Ka/Ks Ratio 0.01252 (Ka = 0.0061, Ks = 0.4849)

LRFN2  (Minke Whale)

Gene Details

leucine rich repeat and fibronectin type III domain containing 2

External Links

Gene match (Identifier: BACU018002, Minke Whale)

Protein Percentage 19.25%
cDNA percentage 39.03%
Ka/Ks Ratio 0.06629 (Ka = 1.2028, Ks = 18.1435)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1560 bp    Location:38463..28630   Strand:-
>bmy_11324
ATGGCGAAGACGGGGTCCTTGGCTGTGAATCTGCTGGGGAAGACTCTGGGAGAGGCAGAAAGGACCAGAAAGGCCGAGTCCAGTGCAGACGCCTCCCTGTGTATCCACACTCTCCGCATTCCACCTCTGAGGCGCCGCAGCCTGAGTGACCAGACCATGGAGACCCTGCTTGGTGGCCTGCTGGCGTTTGGCATGGCGTTTGCCGTGGTCGACGCCTGCCCCAAGTACTGTGTCTGCCAGAACCTGTCTGAGTCACTGGGGACCCTGTGCCCCTCCAAGGGGCTGCTCTTCGTACCCCCTGACATCGACCGGCGGACGGTGGAGCTGCGTCTGGGCGGCAACTTTATCATCCACATCGGCCGCCAGGACTTCGCCAACATGACGGGGCTGGTGGACCTGACACTGTCCAGGAACACCATCAGCCACATCCAGCCCTTCTCCTTCCTAGACCTCGAGAGCCTGCGCTCCCTGCACCTCGACAGCAACCGGCTGCCCAGCCTCGGGGAGGACACCCTGCGGGGCCTGGTCAACCTGCAGCACCTCATTGTGAACAACAACCAGCTGGGAGGCATCGCAGACGAGGCCTTCGAGGACTTCCTGCTGACGCTGGAGGATCTGGACCTCTCCTACAACAACCTCCACGGCCTGCCCTGGGGCTCCGTGCGGCGCATGGTCAACCTGCACCAGCTGAGCCTGGACCACAACCTGCTGGACCACATCACCGAGGGCACCTTCGCCGACCTGCAGAAACTGGCCCGCCTGGACCTCACCTCCAACCGGCTGCAGAAGCTGCCCCCGGACCCCATCTTCGCCCACTCCCAGGCCTCTGCCCTGACGGCCACGCCCTTCGCTCCACCCCTGTCCTTTAGTTTTGGGGGAAACCCACTGCACTGTAACTGCGAGCTTCTCTGGCTGCGGAGGCTCGAGCGGGATGATGACCTGGAGACTTGTGGCTCCCCGGGGGGCCTCAAGGGCCGTTACTTCTGGCACGTGCGCGAGGAGGAGTTTGTGTGCGAACCGCCTCTCATCACCCAGCACACGCACAAGCTGCTGGTCCTGGAGGGCCAGGCGGCCACACTCAAGTGCAAGGCCATCGGGGACCCCAGCCCCCTCATCCACTGGGTGGCCCCCGATGACCGCCTGGTGGGGAACTCCTCCAGGACTGCCGTGTATGACAACGGCACCCTGGACATCCTCATCACCACGTCTCAGGACAGCGGCGCCTTCACCTGCATCGCTGCCAACGCCGCCGGGGAGGCCACGGCCACAGTGGAGGTCTCCATTGTCCAGCTGCCACACCTCAGCAATAGCACCAGCCGCACGGCATCCCCCAAGTCCCGCCTCTCGGACATCACTGGCTCCAGCAAGACCAGCCGGGGAGGTGGAGGTAGTGGGGGCGGGGAGCCTCCCAAAAGTCCCCCGGAACGGGCTGTGCTGGTGTCCGATGTGACCACCACCTCGGCCCTGGTCAAGTGGTCGGTCAGCAAGTCCGCCCCCCGGGTGAAGATGTACCAGCTGCAGTACAACTGCTCCGACGATGAGGTACTGATTTACAGGTGA

Related Sequences

bmy_11324T0 Protein

Length: 520 aa      View alignments
>bmy_11324T0
MAKTGSLAVNLLGKTLGEAERTRKAESSADASLCIHTLRIPPLRRRSLSDQTMETLLGGLLAFGMAFAVVDACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLGGNFIIHIGRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGGIADEAFEDFLLTLEDLDLSYNNLHGLPWGSVRRMVNLHQLSLDHNLLDHITEGTFADLQKLARLDLTSNRLQKLPPDPIFAHSQASALTATPFAPPLSFSFGGNPLHCNCELLWLRRLERDDDLETCGSPGGLKGRYFWHVREEEFVCEPPLITQHTHKLLVLEGQAATLKCKAIGDPSPLIHWVAPDDRLVGNSSRTAVYDNGTLDILITTSQDSGAFTCIAANAAGEATATVEVSIVQLPHLSNSTSRTASPKSRLSDITGSSKTSRGGGGSGGGEPPKSPPERAVLVSDVTTTSALVKWSVSKSAPRVKMYQLQYNCSDDEVLIYR*