Part of scaffold_612 (Scaffold)

For more information consult the page for scaffold_612 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TREM2 ENSTTRG00000002509 (Bottlenosed dolphin)

Gene Details

triggering receptor expressed on myeloid cells 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002351, Bottlenosed dolphin)

Protein Percentage 76.05%
cDNA percentage 80.24%
Ka/Ks Ratio 0.48656 (Ka = 0.0968, Ks = 0.199)

TREM2 ENSBTAG00000007275 (Cow)

Gene Details

triggering receptor expressed on myeloid cells 2 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009568, Cow)

Protein Percentage 82.61%
cDNA percentage 86.23%
Ka/Ks Ratio 0.32844 (Ka = 0.1116, Ks = 0.3397)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 750 bp    Location:677116..672388   Strand:-
>bmy_11332
GCAGCGCCTGACGAGCCTGACCCTCTCCTTTCTGCAGTTCAAGGGAAAGACGAGATCTTGCACAAGGCACCCTGCGTCTGTCCTCCACAAGAGAAGGGTGACATGGAGCCTCTTGGGCTGCTCATCTTGCTCTTTGTCACAGGCCGGTCCCTGAGGGTCTCCTGCCCCTACAACTTCTTGAAGCACTGGGGGAGACGCAAAGCCTGGTGCCGCCAGCTGGGTGAAGAGGGCCTGTGCCAGCAGGTGGTCAGCACTCACCCCTCGTGGCTGCTGTCCTTCCTGAAGAGGCGCAATGGGAGCACGGCCATCATGGACGATGCCCTGGGTGGCACACTCACCATTACGCTGCGGAATCTTCAAGCCCACGACGCTGGCCTCTATCAGTGCCAGAGTCTCCATGGTAGCGAGGCCGACACCCTCAGGAAGGTCCTGGTGGAGGTGCTGGCTGACCCCCTTGATTACCAGGASCCTGGAGATCTCTGGATCCCTGAGGAGTCCAAGAGCTTTGAGGATGCCCACGTGGAGCACAGCATCTCCAGGAACCTTTCTGATGAGGAGAGCCCCTTCCCACCCATTTCCATCCTTTTCCTCCTGGCCTGCATCTTTCTCAGCAAGCTTCTAGCAGCCAGCGCTCTCTGGGCTGCAGCCTGGCATGGGCAGAAACGGAGGACACCCCATGCCAGTGGGCTGGACTGTGGCCATGACCCAGGTTACCAGCTCCAAACCGTGACAGAGCTGAGAGACACGTGA

Related Sequences

bmy_11332T0 Protein

Length: 250 aa      View alignments
>bmy_11332T0
AAPDEPDPLLSAVQGKDEILHKAPCVCPPQEKGDMEPLGLLILLFVTGRSLRVSCPYNFLKHWGRRKAWCRQLGEEGLCQQVVSTHPSWLLSFLKRRNGSTAIMDDALGGTLTITLRNLQAHDAGLYQCQSLHGSEADTLRKVLVEVLADPLDYQXPGDLWIPEESKSFEDAHVEHSISRNLSDEESPFPPISILFLLACIFLSKLLAASALWAAAWHGQKRRTPHASGLDCGHDPGYQLQTVTELRDT*