Sequence detailsbmy_11345 (Coding sequence)

Part of scaffold_610 (SequenceType object (1))

For more information consult the page for scaffold_610 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC39A6ENSTTRG00000007101 (Bottlenosed dolphin)

Gene Details

solute carrier family 39 (zinc transporter), member 6

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006710, Bottlenosed dolphin)

Protein Percentage 99.0%
cDNA percentage 98.76%
Ka/Ks Ratio 0.15637 (Ka = 0.005, Ks = 0.0318)

BT.25759ENSBTAG00000000998 (Cow)

Gene Details

zinc transporter ZIP6

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001322, Cow)

Protein Percentage 95.71%
cDNA percentage 94.71%
Ka/Ks Ratio 0.13536 (Ka = 0.0217, Ks = 0.1602)

SLC39A6 (Minke Whale)

Gene Details

solute carrier family 39 (zinc transporter), member 6

External Links

Gene match (Identifier: BACU001597, Minke Whale)

Protein Percentage 99.57%
cDNA percentage 99.33%
Ka/Ks Ratio 0.11433 (Ka = 0.0021, Ks = 0.0186)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC39A6 (Human)   Slc39a6 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2100 bp    Location:970644..994311   Strand:+
Raw sequence 
>bmy_11345
ATGGCGAGGAATTTATCAGTGATCTTGATCCTGACCTTCGTTCTGTCAGTCACAAATCCCCTTCATGAAGTAGGACCAGCCACTGCTTTCCCTCAGACCACTGAGAAAATTATTCCGAATTGGGAATCCGGCATTAATGTTGACTTGGCAGTTACCACACGGCAGCATCATCTACAGCAGCTTTTCCATCGCTATGGAGAAAATAATTCCTTGTCAATTGAAGGGTTCAGAAAATTGCTTCAGAATATAGGCATAGATAAGATTAAGAGAATCCATATACACCATGACCACGAGCATCACTCTCACCATAGTCATGCTGCTTCCAGTAAAAATCGAAAAGCTCTTTGCCCAGACCATGACTCTGATAGTTCAAGTAAAGAGCCTAGAAACAGCCAGGGGAAAGGACCTCATCGATCAGAACATGCCAATGGTAGAAGGAATGTTTTAATCAAGGATGGCGCTGGTGCTAGTGAAGTGACCTCAACTGTGTATAATGCTGTCTCTGAAGGAACTCACTTTCTAGAGACCATAGAAACTCCAAAACATGGAAAACTTCTCCCCAAAGGTGTGAGCAGTTCCACTCTACCCAGTGTCACAGAAAAGAGCTGGGCGACCTGGCTGGCTAGTAGGAAAACAAATGAATCTGTGAGTGAGCCCAGAAAAGGCTTTATGTATTCCAGAAGCACAAATGAAAATACTCAGGAGTGTTTCAATGCATCAAAGCTGCTTACATCTCATGGCATGGGCATCCAGGTTCCACTGAATGCCACTGAGTTCAACTATCTCTGCCCAGCCATCATCAATCAGATTGATACTAGATCATGTCTGATTCATACAACGAGTGAAAAGAAAGCTGAAATCCCTCCAAAGACGTATTCTTTACAAATAGCCTGGGTTGGTGGCTTTATAGCCATTTCTGTCATCAGTTTCCTGTCTTTGCTGGGTGTTATCTTAGTGCCTCTCATGAATCGGTCTCATGCAAGTCATCACCATAGTCACAGCCATGAAGAACCAGCAATGGAAATGAAGAGAGGACCGCTTTTCAGCCATCTCTCTTCTCAAAACATAGAAGAAAGTACCTATTTTGATTCCACGTGGAAAGGTCTGACAGCTCTGGGAGGCTTGTATTTCATGTTTCTTGTTGAACATGTCCTCACGTTGATCAAGCAATTTAAAGATAAGAAGAAAAAGAATCAGAAAAAACCTGAAAATGATGATGATGTGGAGATTAAGAAGCAGTTGTCCCAGTATGAATCTCAACTGTCAACAAATGAGGAGAAAGTAGACGCAGATGATCGACCTGAAGGCTATTTGCGAGCTGACTCACAAGAGCCCTCCCACTTTGATTCTCAACAGCCAGCAATCTTGGAAGAAGAGGAGGTCATGATAGCTCATGCTCATCCACAGGAAGTTTACAATGAATACGTACCCAGAGGGTGCAAGAATAAATGCCATTCGCATTTCCATGATACACTTGGCCAGTCAGATGACCTCGTTCACCACCATCATGACTACCATCATATTCTCCATCACCACCACCACCAAAACCACCACCCACACAGTCACAGTCAGCGCTACTCTCGGGAGGAGCTGAAGGATGCCGGCATCGCCACACTGGCGTGGATGGTGATCATGGGGGACGGCCTGCACAATTTCAGCGATGGCCTAGCAATTGGTGCTGCTTTTACTGAAGGTTTATCGAGTGGCTTAAGTACTTCTGTTGCTGTGTTTTGTCATGAGTTGCCTCATGAATTAGGTGACTTTGCTGTTTTACTAAAGGCTGGCATGACTGTTAAGCAGGCTGTTCTTTATAATGCTCTGTCAGCCATGCTGGCGTATCTCGGAATGGCGACAGGAATTTTCATTGGTCATTATGCTGAAAATGTTTCTATGTGGATATTTGCACTTACTGCAGGCTTATTCATGTATGTTGCTCTGGTTGATATGGTACCTGAGATGCTGCACAATGATGCTAGTGACCATGGATGTAGCCGCTGGGGATATTTCTTTTTACAGAATGCTGGGATACTTTTGGGATTTGGAATTATGTTGCTTATTTCCATATTTGAACATAAAATTGTGTTTCGTATAAATTTCTAA

Related Sequences

bmy_11345T0 SequenceType object (3)

Length: 700 aa      View alignments
>bmy_11345T0
MARNLSVILILTFVLSVTNPLHEVGPATAFPQTTEKIIPNWESGINVDLAVTTRQHHLQQLFHRYGENNSLSIEGFRKLLQNIGIDKIKRIHIHHDHEHHSHHSHAASSKNRKALCPDHDSDSSSKEPRNSQGKGPHRSEHANGRRNVLIKDGAGASEVTSTVYNAVSEGTHFLETIETPKHGKLLPKGVSSSTLPSVTEKSWATWLASRKTNESVSEPRKGFMYSRSTNENTQECFNASKLLTSHGMGIQVPLNATEFNYLCPAIINQIDTRSCLIHTTSEKKAEIPPKTYSLQIAWVGGFIAISVISFLSLLGVILVPLMNRSHASHHHSHSHEEPAMEMKRGPLFSHLSSQNIEESTYFDSTWKGLTALGGLYFMFLVEHVLTLIKQFKDKKKKNQKKPENDDDVEIKKQLSQYESQLSTNEEKVDADDRPEGYLRADSQEPSHFDSQQPAILEEEEVMIAHAHPQEVYNEYVPRGCKNKCHSHFHDTLGQSDDLVHHHHDYHHILHHHHHQNHHPHSHSQRYSREELKDAGIATLAWMVIMGDGLHNFSDGLAIGAAFTEGLSSGLSTSVAVFCHELPHELGDFAVLLKAGMTVKQAVLYNALSAMLAYLGMATGIFIGHYAENVSMWIFALTAGLFMYVALVDMVPEMLHNDASDHGCSRWGYFFLQNAGILLGFGIMLLISIFEHKIVFRINF*