Part of scaffold_613 (Scaffold)

For more information consult the page for scaffold_613 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GFAP ENSTTRG00000006246 (Bottlenosed dolphin)

Gene Details

glial fibrillary acidic protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005905, Bottlenosed dolphin)

Protein Percentage 78.79%
cDNA percentage 79.55%
Ka/Ks Ratio 0.17161 (Ka = 0.0128, Ks = 0.0747)

GFAP ENSBTAG00000013534 (Cow)

Gene Details

Glial fibrillary acidic protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017997, Cow)

Protein Percentage 97.73%
cDNA percentage 95.12%
Ka/Ks Ratio 0.02915 (Ka = 0.0093, Ks = 0.3188)

GFAP  (Minke Whale)

Gene Details

glial fibrillary acidic protein

External Links

Gene match (Identifier: BACU008414, Minke Whale)

Protein Percentage 99.75%
cDNA percentage 99.58%
Ka/Ks Ratio 0.04426 (Ka = 0.001, Ks = 0.0226)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1344 bp    Location:464967..474423   Strand:+
>bmy_11375
ATGAGAGGCACTCTCCCCACGGCTGGGCTGCGGCCCAGCCCCACCCACTCAGGCTATGCCAGGGGGTGTTGCCAGGGGCAGCCTGGGCCGGGCCAGGCCGGGCCCTCCTCCATAAAGCCAGCACATCCCAGGAGCAGGCAGAGCCAGGACAGGATGGAGAGGAGACGGGTCACCTCAGCGGCTCGCCGCTCCTATGTCTCCTCCTCAGAGATGGGGATGGGGGGCCGCCGCCTGGGTCCTGGCACCCGCCTGTCCCTGGCTCGAATGCCGCCTCCACTCCCGGCCCGGGTGGACTTCTCCTTGGCCGGGGCGCTCAGCTCCGGCTTCAAGGAGACCCGGGCCAGTGAGCGGGCGGAGATGATGGAGCTCAATGACCGCTTCGCCAGCTACATCGAGAAGGTGCGCTTCCTGGAACAGCAGAACAAGGCGCTGGCTGCCGAGCTGAACCAGCTGCGGGCCAAGGAGCCCACCAAGCTTGCCGACGTCTACCAGGCGGAGCTGCGCGAGCTGCGGCTGCGGCTTGATCAACTTACCGCCAACAGCGCCCGGCTCGAGGTGGAGAGGGACAATCTGGCGCAGGACCTGGGCACCCTGAGGCAGAAGCTCCAGGATGAAACCAACCTGAGGCTGGAGGCTGAGAACAACCTGGCTGCCTATCGACAGGAGGTGCGGGAGCTCCAGGAGCAGCTAGCTCAGCAGCAGGTCCACGTGGAGATGGATGTGGCCAAGCCCGACCTCACAGCAGCCCTGAGAGAGATCCGTACGCAGTACGAGGCAGTGGCGTCCAGCAACATGCATGAGGCGGAGGAGTGGTACCGGTCCAAGTTTGCGGACTTGACGGACGCCGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAGGCCAACGACTACCGGCGCCAGCTGCAGGCCTTAACCTGCGACCTAGAGTCCTTGCGCGGCACGAACGAGTCCCTGGAGAGGCAGATGCGGGAGCAGGAGGAGCGCCACGCGCGGGAGGCGGCGAGTTACCAGGAGGCGCTGGCCCGGCTGGAAGAGGAGGGGCAGAGCCTCAAGGACGAGATGGCCCGCCACCTGCAGGAGTACCAGGACCTGCTCAACGTTAAACTGGCCCTGGACATCGAGATCGCCACCTACAGGAAGCTGCTGGAGGGCGAGGAGAACCGCATCACCATTCCTGTGCAGACCTTCTCCAACCTGCAGATCCGAGAAACCAGCCTGGACACCAATTCTATGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGA

Related Sequences

bmy_11375T0 Protein

Length: 448 aa      View alignments
>bmy_11375T0
MRGTLPTAGLRPSPTHSGYARGCCQGQPGPGQAGPSSIKPAHPRSRQSQDRMERRRVTSAARRSYVSSSEMGMGGRRLGPGTRLSLARMPPPLPARVDFSLAGALSSGFKETRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQAELRELRLRLDQLTANSARLEVERDNLAQDLGTLRQKLQDETNLRLEAENNLAAYRQEVRELQEQLAQQQVHVEMDVAKPDLTAALREIRTQYEAVASSNMHEAEEWYRSKFADLTDAAARNAELLRQAKHEANDYRRQLQALTCDLESLRGTNESLERQMREQEERHAREAASYQEALARLEEEGQSLKDEMARHLQEYQDLLNVKLALDIEIATYRKLLEGEENRITIPVQTFSNLQIRETSLDTNSMSEGHLKRNIVVKTVEMRDGEVIKESKQEHKDVM*