Part of scaffold_613 (Scaffold)

For more information consult the page for scaffold_613 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GJC1 ENSTTRG00000005313 (Bottlenosed dolphin)

Gene Details

gap junction protein, gamma 1, 45kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005010, Bottlenosed dolphin)

Protein Percentage 93.02%
cDNA percentage 95.35%
Ka/Ks Ratio 0.44462 (Ka = 0.0368, Ks = 0.0829)

GJC1 ENSBTAG00000004036 (Cow)

Gene Details

Gap junction gamma-1 protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005277, Cow)

Protein Percentage 97.47%
cDNA percentage 95.12%
Ka/Ks Ratio 0.06942 (Ka = 0.0119, Ks = 0.1721)

GJC1  (Minke Whale)

Gene Details

gap junction protein, gamma 1, 45kDa

External Links

Gene match (Identifier: BACU008418, Minke Whale)

Protein Percentage 99.49%
cDNA percentage 99.58%
Ka/Ks Ratio 0.28076 (Ka = 0.0024, Ks = 0.0087)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1383 bp    Location:524785..560554   Strand:+
>bmy_11379
ATGGCGGAGCGCACAGAATACAACTCCGGGGCTCGTTGGACCAACACCCCAGGATACCCCGAGGGAATCTGGAAAACTTGTGAGCAAAACATCATTTCTCTAAGAAAATTTTGGATAACAGAAATTCTGGATAACAGGTACCTCTTCACAATGGAGTCCATCCAGCCCAGGTGGCGAACCAGTTCAGTCACCATGAGTTGGAGCTTCCTCACTCGCCTGCTAGAGGAGATCCACAACCACTCCACGTTTGTGGGGAAGATCTGGCTTACTGTATTGATCGTCTTCCGGATTGTCCTTACAGCTGTAGGAGGAGAGTCCATCTATTACGACGAGCAAAGCAAGTTTGTGTGCAACACAGAGCAGCCAGGCTGCGAGAACGTCTGCTATGATGCCTTTGCACCCCTCTCCCACGTGCGCTTCTGGGTGTTCCAGATCATCCTGGTGGCCACCCCCTCAGTGATGTACCTGGGCTATGCCATTCATAAGATTGCCAAAATGGAGCACGGTGAAGCAGACAAGAAGGCCACTCGGAGCAAACCCTATGCAATGCGTTGGAAACAACACCGGGCACTGGAAGAAACAGAAGAGGACCATGAAGAGGATCCCATGATGTATCCAGAAATGGAATTAGAAAGTGAAAAAGAAAATAAAGATCAGAACCAATCTAAACCTAAGCATGATGGCCGACACCGGATTCAGGAGGATGGGCTCATGAAAATCTACGTGCTGCAGCTGCTGGCAAGGACCGTGTTTGAGGTGGGTTTTCTGATAGGGCAGTACTTTCTGTATGGCTTCCAAGTCCACCCATTTTATGTGTGCAGCAGGCTTCCTTGCCCTCATAAGATAGACTGCTTTATTTCTAGACCCACTGAAAAGACCATCTTTCTTCTGATAATGTATGGTGTTACAGGCCTTTGCCTATTGCTTAACGTTTGGGAGATGCTTCATTTAGGATTTGGGACAATTCGAGACTCACTAAACAGTAAAAGGAGGGAACTGGAAGATCCGGGTGCTTATAATTATCCTTTCACTTGGAACACACCATCTGCTCCCCCTGGCTATAACATTGCCGTCAAACCAGATCAAATCCAGTACACCGAACTGTCCAATGCTAAGATTGCCTACAAGCAAAACAAGGCCAACATCGCCCAGGAACAACAGTATGGCAGCCATGAGGACAACCTCCCAGCTGACCTGGAGACTCTGCAGAGGGAAATCAAAATGGCTCAGGAACGCCTGGATCTGGCAATCCAGGCCTACAATCACCAAAACAACCACCATGGTCCCCGGGAAAAAAAAGCCAAAGTGGGGTCCAAAGCTGGGTCCAACAAAAGCAGTGCTAGTAGCAAATCAGGGGATGGGAAGACCTCCGTCTGGATTTAA

Related Sequences

bmy_11379T0 Protein

Length: 461 aa      View alignments
>bmy_11379T0
MAERTEYNSGARWTNTPGYPEGIWKTCEQNIISLRKFWITEILDNRYLFTMESIQPRWRTSSVTMSWSFLTRLLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIAKMEHGEADKKATRSKPYAMRWKQHRALEETEEDHEEDPMMYPEMELESEKENKDQNQSKPKHDGRHRIQEDGLMKIYVLQLLARTVFEVGFLIGQYFLYGFQVHPFYVCSRLPCPHKIDCFISRPTEKTIFLLIMYGVTGLCLLLNVWEMLHLGFGTIRDSLNSKRRELEDPGAYNYPFTWNTPSAPPGYNIAVKPDQIQYTELSNAKIAYKQNKANIAQEQQYGSHEDNLPADLETLQREIKMAQERLDLAIQAYNHQNNHHGPREKKAKVGSKAGSNKSSASSKSGDGKTSVWI*