Part of scaffold_620 (Scaffold)

For more information consult the page for scaffold_620 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ERCC8 ENSTTRG00000004434 (Bottlenosed dolphin)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 8

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004184, Bottlenosed dolphin)

Protein Percentage 96.0%
cDNA percentage 97.63%
Ka/Ks Ratio 0.39463 (Ka = 0.0175, Ks = 0.0443)

ERCC8 ENSBTAG00000021606 (Cow)

Gene Details

DNA excision repair protein ERCC-8

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028792, Cow)

Protein Percentage 95.56%
cDNA percentage 95.11%
Ka/Ks Ratio 0.10199 (Ka = 0.0192, Ks = 0.1878)

ERCC8  (Minke Whale)

Gene Details

excision repair cross-complementation group 8

External Links

Gene match (Identifier: BACU006241, Minke Whale)

Protein Percentage 85.43%
cDNA percentage 88.08%
Ka/Ks Ratio 0.44041 (Ka = 0.1096, Ks = 0.2488)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 678 bp    Location:214296..148045   Strand:-
>bmy_11406
ATGTTCACATCAAGCTCATTTGATAAAACTCTGAAAGTATGGGATACAAATACTTTACAAGTAATTGGTACTAGAGGGCCCAAAGTACAACTTTGTGACTTAAGTGCTGACAGTAAAGCAAAATTATGGGATGTGAGGAGAGCATCAGGATGTTTGATTACTCTTGATCAGCATAATGGGAAAAAGTCACAAGCAGTTGAATCAGCAAACACTGCTCATAATGGGAAAGTTAATGGCTTATGTTTTACAAGTGATGGGCTTCAYCTCCTCACTGTTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAACACACTAGTGAACTATGGAAAAGTATGTAATGACAGTAGAAAAGGATTGAAATTCACTGTCTCCTGTGGCTGCAGTTCAGAATTTGTTTTTGTACCATATGGTAGCACCATTGCTGTTTATACAATTTACTCAGGAGAACAGATAACTATGCTTAAGGGACATTATAAAAGTGTTGACTGCTGTGTATTTCAGTCTAATTTCCAGGAACTTTATAGTGGTAGCAGAGACTGCAATATTCTTGCTTGGATACCATCCGTATATGAATCAGTTCCTGATGATGAGGAGACTTCAACCAGATCACAGTTAAATCCAGCATTTGAAGATGCCTGGAGCAGCAGTGATGAGGAAGGATGA

Related Sequences

bmy_11406T0 Protein

Length: 226 aa      View alignments
>bmy_11406T0
MFTSSSFDKTLKVWDTNTLQVIGTRGPKVQLCDLSADSKAKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNDSRKGLKFTVSCGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFQSNFQELYSGSRDCNILAWIPSVYESVPDDEETSTRSQLNPAFEDAWSSSDEEG*