Sequence detailsbmy_11411 (Coding sequence)

Part of scaffold_622 (SequenceType object (1))

For more information consult the page for scaffold_622 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LCORENSTTRG00000009856 (Bottlenosed dolphin)

Gene Details

ligand dependent nuclear receptor corepressor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009334, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.92%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0023)

LCORENSBTAG00000004029 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005261, Cow)

Protein Percentage 99.31%
cDNA percentage 99.15%
Ka/Ks Ratio 0.23942 (Ka = 0.0044, Ks = 0.0186)

Additional orthologs identified in other species via the OPTIC pipeline.

LCOR (Human)   Lcor (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1629 bp    Location:160596..196947   Strand:+
Raw sequence 
>bmy_11411
TTTGAAAGTATTCTTGAAGGGCTGTTTGGACCTGCATTATTAAAAGATCTCAGTTTATTTAAAGACTGTGAACCTGAAAGCATTTCTGATTGGACTTTTGATGAAAATTGTCTGTTCTGTTGCTTGAGAAGAGATAAAGTAAAGGGACACTTAGTCGGTCTGGATGAACCAGCTTCGGGAGCTGGGCAAGAAGCTCTGCTTAAACGAGAGCAAGCAAAAATCATTCGATTCGAGAGACAAGCAGAAGAGTTCCTCAATGCAGTCTTTTGTAGAAAAGACAGTCCCTGGGTCTCCGACCCCAATATTCCCCTAGTGGCCCGTGAGATCATGCAGCGAATGATCCAACAATTTGCTGCTGAATATACCTCAAAAAATAGCTCTACTCAGGACCCCAGCCAGCCCAATAGCACAAAGAACCAAAGCCTGCTGAAAGCATCTCCAGTCACCACCTCTCCCACGGCTGCAACTACTCAGAACCCTGTGCTCAGCAAACTTCTCATGGCTGACCAAGACTCACCTCTGGACCTTACTGTCAGAAAGTCTCAGTCAGAACCTAGCGAACAAGACGGTGTACTTGATCTATCCACTAAGAAAAGTCCATGTGCTGGCAGCACTTCCCTGAGCCATTCTCCAGGTTGCTCCAGTACTCAAGGGAACGGGCGACCTGGGAGACCCAGCCAGTACCGCCCAGACGGACTTCGGAGTGGTGATGGGGTACCTCCAAGAAGCTTACAGGATGGAACCAGGGAAGGTTTTGGACACTCCACATCACTCAAAGTTCCACTGGCTCGATCCCTGCAGATTAGTGAAGAACTACTGAGCAGAAACCAATTGTCCACAGCTGCCAGCCTTGGACCATCTGGATTACAGAATCATGGACAACACTTAATATTATCCAGGGAAGCCTCTTGGGCAAAACCACATTATGAGTTCAACCTCAGCCGTATGAAGTTCAGGGGAAATGGTGCACTCAACAACATCAGTGACCTTCCTTTTCTTGCAGAAAACTCTGCCTTTCCAAAAATGGCACTTCAAGCAAAACAAGATGGGAAAAAGGATGTGAGCCATTCATCTCCTGTAGATTTAAAGATACCACAAGTTCGAGGAATGGATCTTTCTTGGGAAAATCGCACTGGTGATCAGTACAGCTATAGCTCTTTGGTAATGGGTTCACAAACGGAGAGCGCGCTTAGTAAAAAATTAAGGGCTATTCTTCCAAAACAAAATAGAAAAAGCATGTTAGATGCTGGACCCGATTCTTGGGGCTCAGATGCTGAGCAGTCTACCTCTGGACAGCCATATCCCACATCGGATCAAGAAGGAGATCCTGGCTCCAAGCAGCCTCGGAAGAAAAGAGGGCGTTACAGACAGTACAACAGTGAGATACTGGAGGAAGCAATCTCAGTGGTTATGAGTGGAAAAATGAGTGTTTCCAAAGCTCAGAGTATTTATGGGATTCCCCACAGTACACTGGAGTACAAAGTAAAGGAGAGGCTGGGCACTTTGAAAAACCCTCCAAAGAAAAAGATGAAGTTAATGAGGTCGGAGGGGCCAGATGTTTCTGTAAAGATTGAATTAGATCCCCAGGGAGAGGCAGCACAAAGTGCAAATGAATCAAAAAATGAGTAG

Related Sequences

bmy_11411T0 SequenceType object (3)

Length: 543 aa      View alignments
>bmy_11411T0
FESILEGLFGPALLKDLSLFKDCEPESISDWTFDENCLFCCLRRDKVKGHLVGLDEPASGAGQEALLKREQAKIIRFERQAEEFLNAVFCRKDSPWVSDPNIPLVAREIMQRMIQQFAAEYTSKNSSTQDPSQPNSTKNQSLLKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCAGSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLKVPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFNLSRMKFRGNGALNNISDLPFLAENSAFPKMALQAKQDGKKDVSHSSPVDLKIPQVRGMDLSWENRTGDQYSYSSLVMGSQTESALSKKLRAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQEGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKNE*