Part of scaffold_622 (Scaffold)

For more information consult the page for scaffold_622 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLIT1 ENSTTRG00000009865 (Bottlenosed dolphin)

Gene Details

slit homolog 1 (Drosophila)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009358, Bottlenosed dolphin)

Protein Percentage 93.94%
cDNA percentage 93.59%
Ka/Ks Ratio 0.1057 (Ka = 0.0126, Ks = 0.1195)

SLIT1 ENSBTAG00000043991 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053488, Cow)

Protein Percentage 92.82%
cDNA percentage 91.58%
Ka/Ks Ratio 0.09926 (Ka = 0.0384, Ks = 0.3866)

SLIT1  (Minke Whale)

Gene Details

slit homolog 1 (Drosophila)

External Links

Gene match (Identifier: BACU012440, Minke Whale)

Protein Percentage 96.59%
cDNA percentage 96.8%
Ka/Ks Ratio 0.25358 (Ka = 0.022, Ks = 0.0867)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3972 bp    Location:297239..239461   Strand:-
>bmy_11413
ATGGTGACAAAGCCCCTTTGGACCACAGGTGCTTGGGGCCGGTTAGCTGGGGGACAGGAGGGGTCGCGGGACCTGAGTGAGAACACCATCCAAGCCATCCCCAGAAAGGCTTTTCGTGGAGCCACAGACCTCAAAAATTTCCGCCTGCACTCCAACCACCTGTTCTGCGACTGCCACCTGGCCTGGCTCTCCCAGTGGCTGAGGCAGCGGCCAACCATCGGGCTCTTCACCCAGTGCTCGGGCCCTGCCAGCCTGCGCGGCCTCAACGTGGCCGAGGTCCAGAAGAGTGAGTTCAGCTGCCCAGGCCAGGGGGAGGCGGGGCACGTGCCCTCCTGCACCCTCTCCTCCGGCTCCTGCCCAGCCATGTGCACCTGTAGCAACGGAATTGTGGATTGTCGTGGCAAAGGCCTCACCGCCATCCCCGCCAACCTGCCCGAGACCATGACGGAGATAGACTTGAGCAACAACCAGATCTTGGAGATCGCGCCCGACGCCTTCCAGGGCCTCCGGTCCCTGAACTCGCTGGTCCTCTATGGGAACAAGATCACAGACCTCCCCCAGGGAGTGTTTGGAGGCCTGTTCACCCTACAGCTCCTGCTCCTGAATGCCAACAAGATCAACTGCATCCGGCCCAACACCTTCCAGGACCTGCAGAACCTCTCACTGCTCTCCCTGTATGACAACAAGATCCAGAGTCTCGCCAAGGGCACCTTCACCTCCCTGAGGGCCATCCAGACCTTGCATCTGGCCCAGAACCCTTTCATCTGCGACTGTAACCTCAAGTGGCTGGCGGACTTCCTGCGCACCAACCCCATCGAGACCAGCGGGGCCCGCTGCGCCAGCCCCCGGCGCCTCGCCAACAAGCGCATCGGGCAGATCAAGAGCAAGAAGTTCCGGTGCTCAGCCAAAGAGCAGTACTTCATTCCAGGCACGGAGGATTACCAGCTGAACAGCGAATGCAATAGCGACGTGGTCTGTCCCCACAAGTGCCGCTGCGAGGCCAGCATGGTGGAGTGCTCCAGCCTGAAGCTCACGAAGATCCCTGAGCGCATCCCCCAGGCCACGGCCGAGCTACGATTAAACAACAATGAGATTTCCATCCTGGAGGCCACCGGGATGTTTAAAAAACTCACCCATCTGAAGAAAATCAATCTGAGCAACAACAAGGTGTCGGAGATTGAAGACGGGGCCTTCGAGGGCGCAGCCTCAGTGAGTGAGCTGCACCTGACCGCCAACCAGCTGGAGTCCATCCGGAGCGGCATGTTCCGGGGCCTGGACGGCCTGAGGACGCTGATGCTGAGGAACAACCGCATCAGCTGCATCCACAATGACAGCTTCACGGGTCTGCGCAGCGTCCGTCTCCTCTCGCTCTACGACAACCAGATCGCCACCATCTCCCCTGGAGCCTTCGACACCCTCCAGGCCCTCTCCACGCTGAACCTTCTGGCCAACCCTTTCAACTGCAACTGCCAACTGGCTTGGCTGGGCGACTGGCTGCGCAAGAGGAAGATCGTGACGGGGAACCCGCGATGCCAGAACCCAGATTTCTTGCGGCAGATTCCCCTGCAGGACGTGGCTGTCCCCGACTTCAGGTGTGAGGAAGGCCAGGAGGAGGGGGGCTGCCTACCCCGCCCGCAGTGCCCCCAGGAGTGCGCCTGCCTGGACACCGTGGTCCGATGCAGCAACAAGCACCTGCAGGCCTTGCCCAAGGGCATCCCCAAGAATGCCACAGAGCTCTACCTGGATGGGAATCAGTTCACGCTGGTTCCGGGACAGCTGTCCACCTTCAAGTACCTGCAGCTTGTGGACCTGAGTAACAACAAGATCAGTTCCTTAAGCAATTCCTCTTTCACCAACATGAGCCAGCTAACCACYCTGTCCCTGCATGGTAATGACGTCTCCACCCTCCAAGAGGGCATCTTCACAGATGTGACCTCCCTGTCTCACCTGGCCATTGGTGCCAACCCTCTGTACTGTGACTGCCACCTGCGCTGGTTGTCCAGCTGGGTGAAGACCGGCTACAAGGAACCTGGCATTGCCCGCTGTGCCGGGCCCCCGGATATGGAGGGCAAGCTGCTCCTCACCACGCCTGCCAAGAAGTTTGAATGCCGAGGTCCGCCCACCCTGGCTGTCCAGGCCAAGTGCGATCCCTGCTTGTCCAGCCCATGCCAGAACCGGGGCACCTGCCATAACGACCCCCTTGGGGTGTACAGGTGTGCCTGCCCCAGCGGCTATAAGGGCCGAGACTGCGAGGTGTCCCTGGACAGCTGTTCCAGCAGCCCCTGTGGAAATGGCGGGACCTGCCACTCGCAGGAGGGCGAGGATGCCGGCTTCACGTGCTCCTGCCCCTCCGGCTTTGAAGGACCGACGTGTGGGGTAAACACGGATGACTGTGTGGAACACTCATGTGCCAACGGGGGCACCTGTGTGGATGGCATGGGCAGCTACACCTGCCAGTGCCCCCTGCAGTACTCGGGAGCGGCCTGTGAGCAGCTGGTGGACTTCTGCTCCTCGGATTTGAACCCGTGTCAGCACGAGGCCCAGTGTGTGGGCACCCCAGACGGGCCCAGGTGTGAGTGTGCACCTGGTTATGCGGGTGACAACTGCACGGAGAACCGGGATGACTGCGAGGACCACCGCTGCCAGAATGGGGCCCGGTGCGTGGATGGAGTCAACAGCTACTCCTGCCTCTGTGCTGAGGGTTACAGTGGGCAGCTCTGTGAGACCCCTCCCCGCCCACCTGCCCCCAGGAGCCCCTGYGAGGGGACTGAGTGCCAGAACGGGGCCAACTGTGTGGACCAGGGCAGCCAGCCTGTGTGCCAGTGCCTCCCGGGCTTTGGCGGCCCCGAGTGTGAGAAGTTGCTCAGTGTCAACTTCGTGGATCGGGACACTTACCTACAGTTCACCGACCTGCAGAACTGGCCACGGGCCAACATCACACTGCAGGTCTCCACAGCAGAGGACAATGGGATCCTGCTGTACAATGGGGACGACGACCACATTGCGGTAGAGCTGTACCAGGGCCATGTACGTGTCAGCTACGACCCGGGCAGCTACCCCAGCTCTGCCATCTACAGTGCCGAGACGATCAATGATGGGCAGTTCCACACCGTTGAGCTGGTCACCTTTGACCAGATGGTGAATCTCTCCATCGATGGCGGCAGCCCCATGACCATGGACAACTTCGGCAAACACTACACACTAAACAGCGAGGCGCCCCTCTATGTGGGAGGGATGCCAGTGGACGTGAATTCGGCTGCCTTCCGCCTGTGGCAGATCCTCAATGGCACGAGCTTCCACGGTTGCATCCGAAACCTGTACATCAACAACGAGTTGCAGGACTTCACCAAGACGAGGATGAAGCCAGGGGTGGTGCCAGGCTGTGAGCCCTGCCGGAAGCTCTACTGCCTGCATGGCATCTGCCAGCCCAATGCCACACCGGGGCCCGTGTGCCACTGCGAGGCCGGCTGGGAGGGCCTGCACTGCGACCAGCCAGCCGACGGCCCCTGCCATGGCCACAAGTGTGTCCACGGGAAGTGCATGCCTCTAGATGCTCTTTCCTACAGCTGCCAGTGCCAGGATGGGTACTCGGGGGCCCTGTGCAACCAGGCTGGGGCACCTGCAGACCCCTGTGGGGGCCTGCGGTGCCTGCACGGCCACTGCCAGGCCTCAGCCACCAAGGGGACGCACTGTGTGTGCAACCCCGGCTTTTCGGGCGAGCTGTGCGAGCAAGAGTCCGAGTGCCGGGGGGACCCTGTCCGGGACTTTCACCAGGTCCAGAGGGGCTATGCCATCTGCCAGACCACGCGCCCGCTGTCGTGGGTGGAGTGCCGGGGCTCATGCYCCGGCCAGGGCTGCTGCCAGGGCCTGCGRCTGAAGCGGAGGAAGTTCACCTTTGAGTGCAGCGATGGGACCTCTTTTGCCGAGGAGGTGGAGAAGCCCACCAAGTGTGGCTGTGCCTTCTGCGCTTAG

Related Sequences

bmy_11413T0 Protein

Length: 1324 aa      View alignments
>bmy_11413T0
MVTKPLWTTGAWGRLAGGQEGSRDLSENTIQAIPRKAFRGATDLKNFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCPGQGEAGHVPSCTLSSGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIDLSNNQILEIAPDAFQGLRSLNSLVLYGNKITDLPQGVFGGLFTLQLLLLNANKINCIRPNTFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEASMVECSSLKLTKIPERIPQATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRSVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAVPDFRCEEGQEEGGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNATELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLSLHGNDVSTLQEGIFTDVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECRGPPTLAVQAKCDPCLSSPCQNRGTCHNDPLGVYRCACPSGYKGRDCEVSLDSCSSSPCGNGGTCHSQEGEDAGFTCSCPSGFEGPTCGVNTDDCVEHSCANGGTCVDGMGSYTCQCPLQYSGAACEQLVDFCSSDLNPCQHEAQCVGTPDGPRCECAPGYAGDNCTENRDDCEDHRCQNGARCVDGVNSYSCLCAEGYSGQLCETPPRPPAPRSPCEGTECQNGANCVDQGSQPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGILLYNGDDDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYINNELQDFTKTRMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWEGLHCDQPADGPCHGHKCVHGKCMPLDALSYSCQCQDGYSGALCNQAGAPADPCGGLRCLHGHCQASATKGTHCVCNPGFSGELCEQESECRGDPVRDFHQVQRGYAICQTTRPLSWVECRGSCXGQGCCQGLRLKRRKFTFECSDGTSFAEEVEKPTKCGCAFCA*