Sequence detailsbmy_11419 (Coding sequence)

Part of scaffold_622 (SequenceType object (1))

For more information consult the page for scaffold_622 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

EXOSC1ENSTTRG00000009887 (Bottlenosed dolphin)

Gene Details

exosome component 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009377, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.56%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0192)

EXOSC1ENSBTAG00000012699 (Cow)

Gene Details

exosome complex component CSL4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016879, Cow)

Protein Percentage 98.78%
cDNA percentage 95.53%
Ka/Ks Ratio 0.03224 (Ka = 0.0056, Ks = 0.1747)

Additional orthologs identified in other species via the OPTIC pipeline.

EXOSC1 (Human)   Exosc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 495 bp    Location:611276..605160   Strand:-
Raw sequence 
>bmy_11419
ATGGCGCCACCCGTGAGGTACTGCATCCCCGGCGAACGTCTGTGTAACTTGGAAGAGGGCAGCCCGGGCAGCGGCACCTACACCCGGCATGGCTACATCTTTTCGTCGCTTGCTGGCTGCCTGATAAAGAGCAGCGAGAACGGCGCGCTTCCTGTCATATCTGTGATGAGAGAAACAGAGTCCCAATTACTGCCAGATGTGGGAGCTATTGTAACCTGTAAGGAAGACGTCCGAGCTACTGAAAAAGACAAGGTTGAAATTTATAAGAGTTTCCGCCCAGGGGACATTGTCTTGGCCAAAGTGATCTCCCTAGGTGATGCGCAGTCCAACTACCTCCTAACCACTGCCGAAAATGAGCTGGGAGTGGTGGTGGCCCACAGTGAATCGGGTGTCCAGATGGTTCCCATCAGCTGGTGTGAGATGCAGTGCCCTAAGACCCACACTAAAGAATTCCGGAAAGTGGCCCGAGTACAGCCTGAATTCTTACAGACCTAA

Related Sequences

bmy_11419T0 SequenceType object (3)

Length: 165 aa      View alignments
>bmy_11419T0
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLIKSSENGALPVISVMRETESQLLPDVGAIVTCKEDVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTKEFRKVARVQPEFLQT*