Sequence details bmy_11421 (Coding sequence)

Part of scaffold_622 (Scaffold)

For more information consult the page for scaffold_622 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MMS19 ENSTTRG00000009892 (Bottlenosed dolphin)

Gene Details

MMS19 nucleotide excision repair homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009381, Bottlenosed dolphin)

Protein Percentage 95.1%
cDNA percentage 94.83%
Ka/Ks Ratio 0.44209 (Ka = 0.0401, Ks = 0.0907)

MMS19 ENSBTAG00000012704 (Cow)

Gene Details

MMS19 nucleotide excision repair protein homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053458, Cow)

Protein Percentage 91.22%
cDNA percentage 90.16%
Ka/Ks Ratio 0.2759 (Ka = 0.0631, Ks = 0.2287)

MMS19  (Minke Whale)

Gene Details

MMS19 nucleotide excision repair homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU012433, Minke Whale)

Protein Percentage 94.83%
cDNA percentage 95.1%
Ka/Ks Ratio 0.5847 (Ka = 0.0426, Ks = 0.0728)

Additional orthologs identified in other species via the OPTIC pipeline.

MMS19 (Human)   Mms19 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2634 bp    Location:653479..620609   Strand:-
Raw sequence 
>bmy_11421
ATGGGGAAAAGGATCCCCGTAATCTTCTGGTGGCCTTCCGCATCGTCCATGACCTCATCTGCAGAGACTATAGCCTGGGTACACCCTTGTAGCCTTGAATTAGCTGGTTGGGGCTTGCCAGATGAGAGGCTTATAAGTTCTCATTCTTTCTCTGTTGCCTTAGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGTTACTTCCCTATTGATTTTACTCCTCCACCTAATGATCCCCATGGTATCCAGAGAGAAGATCTCATCCTGAGTCTTCGAGCTGTGTTGGCTTCTACACCGCGATTTGCTGAGTTCCTGCTCCCCCTGCTGATTGAGAAAGTGGATTCCGAGATTCTGAGTGCCAAGCTGGATTCTCTGCAGACTGTAAATGCTTGCTGTGCTGTGTACGGACAGAAAGAACTGAAGGACTTCCTCCCCAGCCTTTGGGCTTCTATCCGCAGAGAGGTGTTCCAGACGGCAAGTGAGCGGGTAGAGGCCGAGGGCCTGGCGGCCCTTAACTCCCTGACTGCGTGTTTGTCTCGCTCTGTGCTGAGGGCTGATGCTGAGGACCTCCTTGACTCCTTCCTTAGCAACATTCTACAGGACTGCAGGCACCATCTGTGTGAACCAGACATGAAACTGGTGTGGCCTAGTGCCAAACTGTTGCAGGCGGCTGCAGGTGCATCTGCCCGGGCCTGTGACCACATCACCAGCAACGTGCTGCCCCTACTGCTGGAACAGTTCCACAAGCACAGTCAGAGCAACCAGCGGCGGACAATCCTTGAAATGATCCTGGGTTTCTTGAAGCTGCAACAGAAATGGAGCTATGAAGACAAGGATGAAAGGCCTCTGAGTGGCTTCAAAGACCAGCTGTGCTCACTGGTATTCATGGCCCTGACGGACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGTACACTCACAGTCTTGGGTGCCCAGCCAGATCTCCTGTCTTCTGGGGACTTGGAGCTGGCAGTGGGTCACCTATACAGACTGAGCTTCCTGGAGGAGGATTCCCAGAGTTGCAGGGTGGCAGCACTGGAAGCATCAGGAACCCTGGCCACTCTCTACCCTGTGGCCTTCAGCAGCCACCTAGTGCCCAAGCTTGCTGAGGAGCTGTGTATAGAGGAGTCAGATTTGGCTAGAGGGGATGGGCCCACCAAATGCTCCCGGCATCGGCGCTGTCTGCAGGCCTTGTCAGCTATATCCACACATGCCAGTATTGTCAAGGAGACCCTGCCTCTTCTGCTGCAGCATCTCTGCCAGATGAACAAAGGGAATACGGTTGCAGGAACAAGTGAAGTTATTGCTGTCTGTCAGAGTCTCCAGCAGGTGGCAGAAAAATGCCAGCAAGACCCCGAGAGCTGCTGGTATTTCCATCAGACAGCTATACCTTGCCTGCTTGCCTTGGCTGTGCAGGCTTCCATGCCAGAGAAGGAGCACTCAGTTCTGAAAAAAGTGCTGTTGCAGGATGAGGTCTTGGCCGCCATGGTGTCTGTCATTGGCACTGCCACCACCCACTTGAGCCCTGACTTGGCTGCCCAGAGTGTCGCCCACATTGTGCCCCTCTTCTTGGATGGCAACATCTCCTTCCTGCCTGAAAACAGCTTCCCTGGAAGATTCCAACCATTCCAGGATGGCTCCTCAGGGCAGAGGCGGCTGGTTGCACTGCTTATGGCCTTTGTCTGCTCCCTGCCTCGAAATGTGGAAATCCCTCAGCTGAACCAACTCATGCGGGAACTTTTAGAGCTGAGCTGCTGCCACAGCTGCCCCTTCTCCTCCACTGCTGCTGCCAAGTGCTTTGCAGGACTTCTGAACAAGCATCCTGCAGGGCAACAACTGGATGAATTCCTACAGCTGGCTGTGGACAAAGTGGAGGCTGGCCTGAGCTCTGGGCCCTATCGTAGTCAGGCCTTCACACTGCTTCTCTGGGTCACAAAGGCCCTAGTGCTTAGATATCATCCTCTCAGCTCCTGCCTTACAGACCGGCTCATGGGCCTCCTGAGTGATCCAGAACTAGGCCCAGCAGCAGCTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTGAYGTGCTGACTCGTGCCGGCCATGCTGAAGTGCGGATCATGTTTCGCCAGCGGTTCTTCACGGATAACGTGCCTGCTTTGGTCCGGAGCTTCCATGCTGCTCCTCGAGATGTGAAGCCAAATTACCTGAAGGGTCTGTCTCATGTACTTAACAGGCTGCCAAAGCCTGTGCTCTTGCCGGAGCTGCCCACGCTGCTTTCCTTGCTGCTGGAGGCCCTGTCCTGCCCCGACTCTGTGGTACAGCTCTCCACCCTCAGCTGCCTTCAGCCTCTTCTACTGGAAGCACCCCAAGTCATGAGTCTCCACGTTGACACCCTCGTCACCAAGTTCCTAAACCTCAGCTCCAGCCCTTCCATGGCTGTCCGGATCGCGGCACTGCAGTGTATGCACGCTGTTACTCACCTGCCCACCCCCGTGCTGCTGCCGTACAAACTGCAGGTGATCCGGGCCTTAGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCGTAAGGAAGCAGTGTCAGCCAGGGGAGAATGGTTTCTGCTGGGGAGCCCCGGCAGCTGA

Related Sequences

bmy_11421T0 Protein

Length: 878 aa      View alignments
>bmy_11421T0
MGKRIPVIFWWPSASSMTSSAETIAWVHPCSLELAGWGLPDERLISSHSFSVALGPFVEELFEVTSCYFPIDFTPPPNDPHGIQREDLILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTVNACCAVYGQKELKDFLPSLWASIRREVFQTASERVEAEGLAALNSLTACLSRSVLRADAEDLLDSFLSNILQDCRHHLCEPDMKLVWPSAKLLQAAAGASARACDHITSNVLPLLLEQFHKHSQSNQRRTILEMILGFLKLQQKWSYEDKDERPLSGFKDQLCSLVFMALTDPSTQLQLVGIRTLTVLGAQPDLLSSGDLELAVGHLYRLSFLEEDSQSCRVAALEASGTLATLYPVAFSSHLVPKLAEELCIEESDLARGDGPTKCSRHRRCLQALSAISTHASIVKETLPLLLQHLCQMNKGNTVAGTSEVIAVCQSLQQVAEKCQQDPESCWYFHQTAIPCLLALAVQASMPEKEHSVLKKVLLQDEVLAAMVSVIGTATTHLSPDLAAQSVAHIVPLFLDGNISFLPENSFPGRFQPFQDGSSGQRRLVALLMAFVCSLPRNVEIPQLNQLMRELLELSCCHSCPFSSTAAAKCFAGLLNKHPAGQQLDEFLQLAVDKVEAGLSSGPYRSQAFTLLLWVTKALVLRYHPLSSCLTDRLMGLLSDPELGPAAADGFSLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVRSFHAAPRDVKPNYLKGLSHVLNRLPKPVLLPELPTLLSLLLEALSCPDSVVQLSTLSCLQPLLLEAPQVMSLHVDTLVTKFLNLSSSPSMAVRIAALQCMHAVTHLPTPVLLPYKLQVIRALAKPLDDKKRLVRKEAVSARGEWFLLGSPGS*