Part of scaffold_622 (Scaffold)

For more information consult the page for scaffold_622 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UBTD1 ENSTTRG00000009894 (Bottlenosed dolphin)

Gene Details

ubiquitin domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009383, Bottlenosed dolphin)

Protein Percentage 89.33%
cDNA percentage 90.45%
Ka/Ks Ratio 0.26601 (Ka = 0.074, Ks = 0.278)

UBTD1 ENSBTAG00000012719 (Cow)

Gene Details

Ubiquitin domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016906, Cow)

Protein Percentage 89.94%
cDNA percentage 88.45%
Ka/Ks Ratio 0.13768 (Ka = 0.0694, Ks = 0.504)

UBTD1  (Minke Whale)

Gene Details

ubiquitin domain containing 1

External Links

Gene match (Identifier: BACU012432, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.52%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0257)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 603 bp    Location:703034..705317   Strand:+
>bmy_11422
TTTAAAAATACTGAACACGTCCTACTTTATTATCAAAGAAAGAGAGTAAAATTAAGACTTAAACAGCAGCAGCAACAACAACAAAGGCAGTATATGCTGCGTTTGCTAACAGAAGTGGTTTACACCCCCAGGTTGGGACGCAACGAGCCCCTGAAGAAGGAGCGGCTGAAGTGGAAGAGCGACTACCCAATGACCGATGGGCAGCTGCGGAGCAAGAGGGATGAATTCTGGGACACAGCGCCCGCCTTCGAGGGCCGCAAGGAGATCTGGGACGCCCTCAAGGCTGCCGCCTACGCAGCCGAGGCCAACGACCACGAGCTGGCTCAGGCCATCCTGGACGGAGCCAGCATCACCTTGCCTCATGAGTTCCCGCTGAAGGTACGCCTCTCCACGGGCAAGGACGTGAGGCTCAGCGCCAGCCTGCCTGACACGGTGGGGCAGCTCAAGAGGCAGCTGCACACCCAGGAGGGCATCGAGCCATCCTGGCAGCGATGGTTCTTCTCTGGAAAGCTGCTCACAGATCGCACGCGGCTCCAGGAAACCAAGATCCAGAAAGATTTTGTCATCCAGGTCATCATTAACCAGCCCCCGCTGCCCCAGGAC

Related Sequences

bmy_11422T0 Protein

Length: 201 aa      View alignments
>bmy_11422T0
FKNTEHVLLYYQRKRVKLRLKQQQQQQQRQYMLRLLTEVVYTPRLGRNEPLKKERLKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHEFPLKVRLSTGKDVRLSASLPDTVGQLKRQLHTQEGIEPSWQRWFFSGKLLTDRTRLQETKIQKDFVIQVIINQPPLPQD