Part of scaffold_625 (Scaffold)

For more information consult the page for scaffold_625 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLSTN3 ENSTTRG00000004824 (Bottlenosed dolphin)

Gene Details

calsyntenin 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004548, Bottlenosed dolphin)

Protein Percentage 83.81%
cDNA percentage 83.4%
Ka/Ks Ratio 0.14603 (Ka = 0.0158, Ks = 0.108)

CLSTN3 ENSBTAG00000008129 (Cow)

Gene Details

Calsyntenin-3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010687, Cow)

Protein Percentage 96.64%
cDNA percentage 93.44%
Ka/Ks Ratio 0.05656 (Ka = 0.0175, Ks = 0.3092)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2412 bp    Location:169172..144104   Strand:-
>bmy_11469
ATGGCTGACTTCTTGTCCTCAGTCCTTTCTCCTGCAGCCAACAAGCACAAGCCGTGGATCGAGGCGGAATACCAGGGCATCGTCATGGAGAACGACAACACGGTTCTGCTGAACCCACCACTCTTTGCTTTGGACAAGGATGCCCCCCTGCGCTATGCAGGTGAGATCTGTGGCTTCCGGCTCCATGGGTCTGGGGTGCCCTTTGAGGCCGTGATCCTGGACAAGGCGACAGGAGAAGGGCTGATCCGGGCTAAGGAACCCGTAGACTGCGAGGCCCAGAAGGAGCACACCTTCACCATCCAGGCCTACGACTGCGGCGAGGGCCCCGACGGGGCCAACACCAAGAAGTCCCACAAGATTGAATATGCACCAGGCGCTGGGAGCTTGGCTTTGTTCCCTGGTATCCGCCTGGAGACCTGCGATGAACCTCTCTGGAACATTCAGGCCACCATAGAGCTGCAGACCAACCATGTGGCCAAGGGCTGTGACCGTGACAACTACTCAGAGCGGGCACTGCGGAAACTCTGTGGCGCGGCCCCTGGGGAGGTGGATCTGCTGCCCATGCCCGGCCCCAATGCCAACTGGACGGCGGGCCTCTCGGTGCACTACAGCCAGGACAGCAGCCTTATCTACTGGTTCAACGGCACCCAAGCTGTGCAGGTGCCACTGGGTGGCACTGCTGGGCTGGGCTCCGGGCCCCAGGACAGCCTCAGTGACCATTTTACCCTGTCCTTCTGGATGAAGCACGAGGACGGCTTCTCTCACTACTCGCTGACCGTCCATGGCTGCAGAATTGCCTTCCTCTACTGGCCTCTGCTGGAGAGTGCCCGGCCAGTCAAGTTCCTCTGGAAGCTGGAGCAGGTCTGCGACGATGAGTGGCACCACTATGCTTTGAACCTCGAGTTCCCCACAGTCACACTCTATGCCGATGGCATCTCTTTCGACCCTGCCCTCATCCACGACAATGGTCTCATCCACCCGCCCCGAAGGGAGCCTGCGCTCATGATTGGGGCCTGCTGGACTGAGGAGAAGAACAAAGAGAAGGAAAAGGGAGGCGACAACAGTACAGACGCCACAGCAGGAGACCCCTTGCCGATCCACCACTACTTCCACGGCTACCTGGCCGGTTTCAGCGTGCGCTCAGGTCGCCTGGAGAGCCGTGAGGTCATCGAGTGCCTCTATGCATGTCGGGAGGGGCTGGACTATAGGGATTTCGAGAGCCTGGGCAAAGGCATGAAGGTCCACGTGAACCCCTCGCAGTCCCTGCTCACCCTGGAGGGGGATGATGTGGAGACCTTCAACCATGCCCTGCAGCATGTGGCTTACATGAACACTCTGCGCTTTGCCACGCCCGGCGTCAGGCCCCTGCGCCTCACCACTGCCGTCAAATGCTTCAGCGAAGAATCCTGTGTCTCCATCCCCGAAGTGGAGGGCTACGTGGTGGTGCTCCAGCCTGATGCCCCTCAGATCCTGCTGAGTGGCACTGCTCATTTTGCCCTCCCAGCTGTGGACTTCGAGGGACCCGAGGGTGTCCCTTTGTTCCCTGATCTTCAAATCACTTGCTCCATTTCTCACCAGGTGGAGGCCAAAAAGGATGAGAGTTGGCAGGGCACAGTGACAGACACACGCATGTCGGAAGAGATCGTGCACAACCTGGATGGCTGTGAGATTTCTCTGGTGGGGGATGACCTGGACCCCGAGCGGGAAAGCCTGCTCTTGGACATGGCGTCCTTGCAGCAGCGAGGCTTGGAGCTCACCAACACGTCTGCCTACCTCACCATTGCCGGGGTGGAGGGCATCACTGTGTATGAAGAGATCCTGAGGCTGGCTCGTTACCGGCTGCGACGCGGGGCTGCCCTCTATGCCAGGAAGTTCCGGCTTTCCTGCTCAGAAATGAATGGGCGTTACTCCAGCAATGAATTCGTCGTGGAGGTCAGCGTCCTGCACAGCGTGAACCGGGTCACTCACCCCAGCCACATGCTCAGCTCTCAGCAGTTCCTGCACCGAGGTCACCAGCCCCCGCCTGAGATGGCTGGACACAGTCTGGCCAGCTCCCACCGGAACTCCATGGTCCCGAGCGCGGCGACCCTCATCATCGTGGTGTGCGTGGGCTTCCTGGTGCTCATGGTCGTCCTGGGCCTGGTGCGCATCCACTCGCTGCACCGCCGCGTCTCGGGGGCCGGCGGGCCCCCGGGGGCCTCCAGTGACCCCAAGGATCCCGACCTCTTCTGGGATGACTCAGCTCTCACCATTATCGTGAACCCCATGGAGTCCTACCAGAGCCGGCAGGCCTCCATGGCGGGCACTGCGGGCAGCCAGCAGGAGGACGAGGACAGCAGCGACTCCGAGGCAGCCGACTCGCCCAGCAGCGACGAGAGACGCATCATCGAGACCCCTCCTCACCGCTACTAA

Related Sequences

bmy_11469T0 Protein

Length: 804 aa      View alignments
>bmy_11469T0
MADFLSSVLSPAANKHKPWIEAEYQGIVMENDNTVLLNPPLFALDKDAPLRYAGEICGFRLHGSGVPFEAVILDKATGEGLIRAKEPVDCEAQKEHTFTIQAYDCGEGPDGANTKKSHKIEYAPGAGSLALFPGIRLETCDEPLWNIQATIELQTNHVAKGCDRDNYSERALRKLCGAAPGEVDLLPMPGPNANWTAGLSVHYSQDSSLIYWFNGTQAVQVPLGGTAGLGSGPQDSLSDHFTLSFWMKHEDGFSHYSLTVHGCRIAFLYWPLLESARPVKFLWKLEQVCDDEWHHYALNLEFPTVTLYADGISFDPALIHDNGLIHPPRREPALMIGACWTEEKNKEKEKGGDNSTDATAGDPLPIHHYFHGYLAGFSVRSGRLESREVIECLYACREGLDYRDFESLGKGMKVHVNPSQSLLTLEGDDVETFNHALQHVAYMNTLRFATPGVRPLRLTTAVKCFSEESCVSIPEVEGYVVVLQPDAPQILLSGTAHFALPAVDFEGPEGVPLFPDLQITCSISHQVEAKKDESWQGTVTDTRMSEEIVHNLDGCEISLVGDDLDPERESLLLDMASLQQRGLELTNTSAYLTIAGVEGITVYEEILRLARYRLRRGAALYARKFRLSCSEMNGRYSSNEFVVEVSVLHSVNRVTHPSHMLSSQQFLHRGHQPPPEMAGHSLASSHRNSMVPSAATLIIVVCVGFLVLMVVLGLVRIHSLHRRVSGAGGPPGASSDPKDPDLFWDDSALTIIVNPMESYQSRQASMAGTAGSQQEDEDSSDSEAADSPSSDERRIIETPPHRY*