Sequence detailsbmy_11470 (Coding sequence)

Part of scaffold_625 (SequenceType object (1))

For more information consult the page for scaffold_625 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1RLENSBTAG00000016204 (Cow)

Gene Details

complement C1r subcomponent-like protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021566, Cow)

Protein Percentage 80.82%
cDNA percentage 85.7%
Ka/Ks Ratio 0.18676 (Ka = 0.0999, Ks = 0.5347)

Additional orthologs identified in other species via the OPTIC pipeline.

C1RL (Human)   C1rl (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1521 bp    Location:193876..204022   Strand:+
Raw sequence 
>bmy_11470
ATGCCCGGACTCAGAGTGGGGGAACTGTCTCTGGGGAAGCCCCATTCCACTCGCTGCCCAGGCAACACGTGGTGGCTGCTCCTCTGGGGAGTCCTCCAGGCTTGCCCCACGCAGGGCTGCGTGCTCTTGGCCCAGCCGCTGCCCCAGAAGCTGACGTCCCCCGGGTACCCGGAGCCGTATGTCAAAGGCCAAGAGAGCTCCACCGACATCGAGGCTCCAGAGGGCTTTGCCGTGAGGCTCGTCTTCCAGGACTTCGACCTGGAGCCGTCCCCATACTGTGATCGGGACTCCGTCACAATCACAGCCAGTGGAATGGATCCCAGCCGCTTCTGTGGGCAGCAGGGCTCCCTGCTGGGCAGCCCCCCTGGTCAGAGGGAGTTTGTGTCCTCAGGGAACAGTTTGCGGCTGACCTTCCGTGCACCCGCCTCTGAGGACAGGACCCCGGGCCTCCACAAGGGCTTCCTGGCCCTCTACCAAGCCGTGGGTATGAATCATAGTCAGCCCATCAGYCAGGCCAGTGGGGACCCTGAGGCCATCAACACACCTGGAGACAACTCCACTGAGATCCAGAGCCACTGCCAGGAGCCCTRTTATCAGGCTGTGCCCGCAGGGACACTCACCTGCACCGCCCAGGTGCCCTGGAAGCAGACACAGGAAAGGGAGGAGGTGCCTCGCTGTGTGCCTGTCTGCGGACGGCCGGTCATCCCCATCGCCCAGAACAGGGAGCCCGCTGGTGCCTCCAGAGCTGAGCTGGGCAACTTCCCCTGGCAGGCCTTGACCAGCATCTACGGCCGAGGCGGCGGGGCCCTGCTGGGCGACAGGTGGATCCTCACCGCCGCCCACACCATCTACCCCAAGGACGGCATCTTCCTCGGGAAGAGCCGGCGCGCGCAGGTGTTCCTGGGCCACACGAACATCGACGAGTTGCTGGAGCTGGGCGGCCACCCGGTGCGCCGCGTGGTCGTGCACCCAGACTACCGCCCGGACCAGACCCACAACTTCCACGGGGACATCGCCCTCCTGGAGCTGCGGCACAGTGTCCCCCTGGGCCCCCGCCTCCTCCCGGTCTGCCTGCCCGACCGCAAGGCCCTGTACCGCCCGGGCCTGGCGGGCTACGTCAGCGGCTTTGGCGTGGAGAACGGCCGGTTGACCACGGAGCTGAAATACTCCCGGCTGCCCGTGGCCCCGAGGGCGGCCTGCGAGGCCTGGCTCCGAGAGAAGCGGAGGACCGAGGTGTTCTCCGGCGGCATGTTTTGCGCCGGGGACAGCACGCGGCCGCAGCGGGTCTGCCAGGGGGACAGTGGTGGTGCCTACGTGGTGTGGGACGATCGTGCCCGTCGTTGGGTGGCCACGGGCATCGTATCCTGGGGCATTGGGTGTGGCGAGGGGTACGGCTTCTACACCAAAGTGCTCAACTACGTGGACTGGATCAGAGGAGTGATGGACGGGAAGGATGACCCCGGGGTGCTGAGCAGGGGCACCCACCGTGGAGCCCAGACGGGAGAGGGTTGGGTTGAGGAC

Related Sequences

bmy_11470T0 SequenceType object (3)

Length: 507 aa      
>bmy_11470T0
MPGLRVGELSLGKPHSTRCPGNTWWLLLWGVLQACPTQGCVLLAQPLPQKLTSPGYPEPYVKGQESSTDIEAPEGFAVRLVFQDFDLEPSPYCDRDSVTITASGMDPSRFCGQQGSLLGSPPGQREFVSSGNSLRLTFRAPASEDRTPGLHKGFLALYQAVGMNHSQPISQASGDPEAINTPGDNSTEIQSHCQEPXYQAVPAGTLTCTAQVPWKQTQEREEVPRCVPVCGRPVIPIAQNREPAGASRAELGNFPWQALTSIYGRGGGALLGDRWILTAAHTIYPKDGIFLGKSRRAQVFLGHTNIDELLELGGHPVRRVVVHPDYRPDQTHNFHGDIALLELRHSVPLGPRLLPVCLPDRKALYRPGLAGYVSGFGVENGRLTTELKYSRLPVAPRAACEAWLREKRRTEVFSGGMFCAGDSTRPQRVCQGDSGGAYVVWDDRARRWVATGIVSWGIGCGEGYGFYTKVLNYVDWIRGVMDGKDDPGVLSRGTHRGAQTGEGWVED