Part of scaffold_625 (Scaffold)

For more information consult the page for scaffold_625 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1R ENSBTAG00000008612 (Cow)

Gene Details

complement component 1, r subcomponent precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011362, Cow)

Protein Percentage 84.68%
cDNA percentage 88.65%
Ka/Ks Ratio 0.1879 (Ka = 0.075, Ks = 0.3993)

C1R  (Minke Whale)

Gene Details

complement component 1, r subcomponent

External Links

Gene match (Identifier: BACU003061, Minke Whale)

Protein Percentage 94.61%
cDNA percentage 95.38%
Ka/Ks Ratio 0.31958 (Ka = 0.0358, Ks = 0.112)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2331 bp    Location:206586..217311   Strand:+
>bmy_11471
ATGGACTACAGAGGCCTGAGAACTCAGAGGCCTGTTCTGGATCTGTGTCTCCCTGTGGAGCACACCGCCACAGGGTCTCTGAGCCCTGGAGAGTTGAAGAAAGTCTTCCCCAAAGAGCAAAGGTGGCTCTTACACGTCCTGGTGCCAGTCCTGTTCTGCAGGGTGGGAGGCTCCGTCTTCACCCCTCGGAAGCTCTATGGGGAGGTGACTTCCCCTCTGTACCCCAAGCCTTACCCCGACAACTTTGAGACCACCACCGTGATCACGGTCCCCACGGGATACAGGGTGAAGCTCGTCTTCTGGCAGTTTGACCTGGAGCCTTCGGAAGGCTGTTTCTATGACTATGTCAAGATCTCTGCCGATAAGAAAACCCTGGGGAGGTTCTGTGGGCAGCTGGGCTCTCCACTGGGCAACCCTCCAGGAAGGAAGGAATTTATGTCCCAAGGGAACAAGATGCTGCTGACCTTCCACACGGATTTCTCCAACGAGGAGAACGGCACCATCATGTTCTACAAGGGCTTCCTGGCCTACTACCAAGCTGTGGACCGGGACGAATGTGCCTCCCAGCTCAACTTGGTCGAGGAGAATCCCCAGCCCCGGTGCCAGCACCTGTGTCACAACTACATTGGTGGCTATTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGAAGGACAGGCATTCCTGCCAGGGTGAGGTCAGGGTTGGGAGACAGGGACTGAGCAAGGGCTCACCGGGCCAGCCCGAGTCTCCGGGTGACCCCCCTCCTGGCTTTGCTCTCACAGCCGAGTGCAGCAGCGAGCTGTTCACAGAGCCATCGGGCTACATCTCCAGCCTGGAGTACCCCCGGCCCTACCCCCCCGACCTACGCTGCAACTACAGCATCCGGGTAGAGCGGGGCCTCACCCTCCAACTCAAGTTCCTGGATCCTTTCGAAATCGATGACCACCAGCAAGTACACTGTCCCTACGACCAGCTACAGATCTATGCCAACGAGAGGAACATCGGTGAGTTCTGTGGGAAGCAAAGGCCGGAGCCCATTGACACCAGCAGCAACTCCGTGGACCTGCTGTTCTTCACGGACGAGTCAGGGGACAGCCAAGGCTGGAAGCTGCACTACACCAGCGAAATCATCAAGTGCCCCCAGCCCAAGACCCTAGACTCGTTCACCATCATCCAGGACCTGCAGCCTCAGTACGAGTTCCGGGACTACTTCATCGCCACCTGCAAACAAGGCTACCAGCTCACGGAGGGGAAACAGGCGCTCCTGTCCTTCACAGCTGTCTGCCAGGATGATGGCACATGGCATCGCGCCATGCCCAGGTGCAAGATCAAGGACTGTGGGCAGCCCCGAAGCTTGCCTAACGGAGCCTTCAATTACACCACCACAACGGGGGTGAACACCTACCAGGCCCGTATCCAGTACTACTGCCACGAGCCGTATTACAAGATGCAAACCAGAGGTGGCAGAAGCATGTCTGAGCGAGGGCGGTACACCTGCACAGCTCAGGGCATTTGGAAGAATGAGCTGGCCGGAGAGAAGATGCCTCGGTGTTTGCCAGTGTGCGGGAAACCCGTCAACCCTGTGGAGCACAAGCAACGCATTGTCGGGGGCCAGAAGGCCAAGCTGGGCAACTTCCCCTGGCAGGCCTTCACCAACATCCACGGGCGAGGGGGCGGCGCGCTGCTGGGCGACCGCTGGATCCTCACGGCCGCGCACACCCTCTACCCCAAGGACTACGAAGCGCAGGGCAACGCCACCGTGGACGTGTTCCTGGGCCACGTCAGCGTGGAAGAGATCACCAAGCTGGCCAACCACCCCGTCCGCCGGGTCAGCATCCACCCCGACTACCGCCAGGAGGAGTCCCACAATTTCGAGGGGGACATCGCCCTCCTGGAGCTGGAAAATAGTGTCACCCTGGGCCCCAACCTCCTCCCCATCTGCCTCCCCGACAACGAGACCTTCTATGACCAGGGTCTCATGGGCTATGTCAGTGGCTTTGGGATCATGGAGGAGAGACTTTCTCACAACCTCAGGTTTGTCCGTCTGCCCATCGCTAAGCGAGAGGTTTGTGAGAGCTGGCTCCGGAAAAAAAATAGGAAAGATGTGTTTTCTGAAAACATGTTCTGTTCTGGGGACCCGACTCTAAAGCAAGATGCCTGTCAGGGGGATAGCGGAGGGGTCTTTGCAGTGAGGGATGAGAAAAATGATCGCTGGGTGGCGACAGGCATTGTATCCTGGGGCATCGGCTGCAGCAGGGGGTACGGGTTCTACACCAAACTACTCAACTACGTGGACTGGATCAAGAAAGAGATGGGGGAGGAGGACTGA

Related Sequences

bmy_11471T0 Protein

Length: 777 aa     
>bmy_11471T0
MDYRGLRTQRPVLDLCLPVEHTATGSLSPGELKKVFPKEQRWLLHVLVPVLFCRVGGSVFTPRKLYGEVTSPLYPKPYPDNFETTTVITVPTGYRVKLVFWQFDLEPSEGCFYDYVKISADKKTLGRFCGQLGSPLGNPPGRKEFMSQGNKMLLTFHTDFSNEENGTIMFYKGFLAYYQAVDRDECASQLNLVEENPQPRCQHLCHNYIGGYFCSCRPGYELQKDRHSCQGEVRVGRQGLSKGSPGQPESPGDPPPGFALTAECSSELFTEPSGYISSLEYPRPYPPDLRCNYSIRVERGLTLQLKFLDPFEIDDHQQVHCPYDQLQIYANERNIGEFCGKQRPEPIDTSSNSVDLLFFTDESGDSQGWKLHYTSEIIKCPQPKTLDSFTIIQDLQPQYEFRDYFIATCKQGYQLTEGKQALLSFTAVCQDDGTWHRAMPRCKIKDCGQPRSLPNGAFNYTTTTGVNTYQARIQYYCHEPYYKMQTRGGRSMSERGRYTCTAQGIWKNELAGEKMPRCLPVCGKPVNPVEHKQRIVGGQKAKLGNFPWQAFTNIHGRGGGALLGDRWILTAAHTLYPKDYEAQGNATVDVFLGHVSVEEITKLANHPVRRVSIHPDYRQEESHNFEGDIALLELENSVTLGPNLLPICLPDNETFYDQGLMGYVSGFGIMEERLSHNLRFVRLPIAKREVCESWLRKKNRKDVFSENMFCSGDPTLKQDACQGDSGGVFAVRDEKNDRWVATGIVSWGIGCSRGYGFYTKLLNYVDWIKKEMGEED*