Part of scaffold_625 (Scaffold)

For more information consult the page for scaffold_625 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1S ENSTTRG00000004816 (Bottlenosed dolphin)

Gene Details

complement component 1, s subcomponent

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004541, Bottlenosed dolphin)

Protein Percentage 95.36%
cDNA percentage 96.27%
Ka/Ks Ratio 0.31499 (Ka = 0.0238, Ks = 0.0754)

C1S ENSBTAG00000004840 (Cow)

Gene Details

complement C1s subcomponent precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006358, Cow)

Protein Percentage 84.32%
cDNA percentage 87.77%
Ka/Ks Ratio 0.3283 (Ka = 0.091, Ks = 0.2772)

C1S  (Minke Whale)

Gene Details

complement component 1, s subcomponent

External Links

Gene match (Identifier: BACU003062, Minke Whale)

Protein Percentage 98.42%
cDNA percentage 98.71%
Ka/Ks Ratio 0.26472 (Ka = 0.0074, Ks = 0.0278)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2088 bp    Location:245412..235952   Strand:-
>bmy_11472
ATGGACAAATTGCCAGAGATGTGGTGCATTGTCCTGTTTTCCCTTTTGGCATGGGTTTATGCTGAGCCTACTATGTACGGGGAGATCCTGTCCCCCAACTATCCTCAGGCATACCCCAATGAGGTAGAGAAGTCTTGGGATATAGAAGTTCCTGAAGGGTACGGGATCCACCTTTACTTTACCCACCTGGACATAGAGCTGTCCGAGAACTGCGCATATGACTCAGTGCAGATAATGTCAGGAGGCCTTGAAGAAGGGAAACTCTGTGGACAGAGGACCGGCAAGAATCCCAACTCCCCAGTGGTGGAAGAGTTCCAAGTCCCATACAATAAACTCCAGGTGATCTTCAAGTCAGACTTCTCCAACGAAGAGCGTTTCACTGGGTTTGCTGCGTACTATGTTGCTGTAGATGTAAATGAGTGCACAGACTTTGCAGATGCCCCTTGCAGCCACTTCTGCAACAACTTCATTGGTGGTTACTTCTGCTCCTGCCCCCCAGAATACTTCCTCCATGATGACATGAAGAATTGCGGAGTCAACTGCAGTGGGGATGTATTCACCACACTGATTGGGGAGCTCACAAGTCCCAATTATCCCAGTTTATACCCAGAGAACTCGAGGTGTGACTATCAGATCCTGTTGGAGGAGGGGTTCCAAGTGGTGGTGACTATGCAGAGAGAAGATTTTGATGTGGAACCAGCTGATTCTGCGGGCCACTGCGCTGACAGTTTACTTTTTGTTGCAGGAAACCAGCAATTTGGTCCTTACTGTGGTAATGGATTCCCTGGGCCACTAACTATTGAAACCAAGAGTAATGCTCTCAATATCATCTTCCAAACTGATGAAACAGAGCAAAAAAAGGGATGGAAATTTCGTTACCATGGAGATCCAATCCCTTGTCCTAAAGAAGTCACTGCCAATTCTTTTTGGGAGCCTGATAGAGCAAAATATGTGTTCAAAGATGTGGTGAAGATAACCTGTGTGGATGGGTTTGAAGTTGTACAGGGAAGTGTTGGCTCGACATCTTTCTATTCTACTTGCCAAAGCAATGGAATGTGGAGTAATTCCAAACTGTGGTGTCAACCCGTGGACTGTGGCGCTCCTGAACCCATTCAGCATGGTAGAGTCGAAGATCCGGAAAATACTCTGTTTGGTTCTGTCACTCGCTACACTTGTGAGAAGCCATATTACTACATGGAAAATGAAAGAAGCGAGGAGTATCGCTGCGTTGGCAACGGGAGCTGGGTGAATGAGCTGCTGGGCGCAGAGCTGCCAAAATGTGTTCCAGTCTGTGGCGTCCCTGGTGAGCCCTTTACAGAAAAACAGAGGATATTTGGAGGCTCCACTGCAAAGATTGAAAGTTTCCCCTGGCAAGTCTTCTTCTCGAACCCCAGGGCCGGCGGGGCTCTCATTGACGAGCACTGGGTGCTGACAGCTGCCCACACCGTGGAGGGAAACCGTGACCCAGTGATGTACGTTGGATCCACCTCAGTGGTCACCTCACATTTGGCAAATGCCCAGATGCTCACTGCTGAGAAAGTGTTTATTCATCCCGGTTGGAAGGTCCTGGATGCCTCGGAAATACGGAAGAATTTTGACAATGACATTGCGCTGGTGCGGCTGCAAGACCCAGTGAAAATGGGACCCACTGTCTCCCCTATCTGCCTGCCAGGGACCTCCTCAGAGTACAGCCCGTCAGTGGGAGATCTGGGGCTGATCTCAGGCTGGGGCCGAACAAATACCAGAGACCATGTTAATAAGCTCAGAGGGGCAAAGTTACCCGTTGCTCCCTTAGCAAAGTGCCGGGAGGTGAAGGGGCTAAATCCCGGAATAGATATAAATTCCTTTGTTTTCACTGAGAACATGATCTGTGCTGGAGGTGAGAAGGGTGTTGATAGCTGCGAAGGGGACAGCGGTGGGGCCTTTGCTCTACAGGTYCCTAATGAAGAGAACCCCAAATTCTATGTCGCTGGCTTGGTGTCCTGGGGCCCCCAGTGTGGTACCTATGGGATCTACACTCGCGTCAAGAACTACATTGACTGGATCATGAAGACGATGCAGGAGAATAGTGCCCCCAGTGTAGGCTAA

Related Sequences

bmy_11472T0 Protein

Length: 696 aa      View alignments
>bmy_11472T0
MDKLPEMWCIVLFSLLAWVYAEPTMYGEILSPNYPQAYPNEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIMSGGLEEGKLCGQRTGKNPNSPVVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVAVDVNECTDFADAPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVNCSGDVFTTLIGELTSPNYPSLYPENSRCDYQILLEEGFQVVVTMQREDFDVEPADSAGHCADSLLFVAGNQQFGPYCGNGFPGPLTIETKSNALNIIFQTDETEQKKGWKFRYHGDPIPCPKEVTANSFWEPDRAKYVFKDVVKITCVDGFEVVQGSVGSTSFYSTCQSNGMWSNSKLWCQPVDCGAPEPIQHGRVEDPENTLFGSVTRYTCEKPYYYMENERSEEYRCVGNGSWVNELLGAELPKCVPVCGVPGEPFTEKQRIFGGSTAKIESFPWQVFFSNPRAGGALIDEHWVLTAAHTVEGNRDPVMYVGSTSVVTSHLANAQMLTAEKVFIHPGWKVLDASEIRKNFDNDIALVRLQDPVKMGPTVSPICLPGTSSEYSPSVGDLGLISGWGRTNTRDHVNKLRGAKLPVAPLAKCREVKGLNPGIDINSFVFTENMICAGGEKGVDSCEGDSGGAFALQVPNEENPKFYVAGLVSWGPQCGTYGIYTRVKNYIDWIMKTMQENSAPSVG*