Sequence detailsbmy_11473 (Coding sequence)

Part of scaffold_625 (SequenceType object (1))

For more information consult the page for scaffold_625 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LPCAT3ENSTTRG00000004813 (Bottlenosed dolphin)

Gene Details

lysophosphatidylcholine acyltransferase 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004537, Bottlenosed dolphin)

Protein Percentage 83.57%
cDNA percentage 86.86%
Ka/Ks Ratio 0.41341 (Ka = 0.1163, Ks = 0.2812)

BT.106554ENSBTAG00000013127 (Cow)

Gene Details

lysophospholipid acyltransferase 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000052356, Cow)

Protein Percentage 84.44%
cDNA percentage 85.13%
Ka/Ks Ratio 0.19135 (Ka = 0.0998, Ks = 0.5215)

LPCAT3 (Minke Whale)

Gene Details

lysophosphatidylcholine acyltransferase 3

External Links

Gene match (Identifier: BACU003063, Minke Whale)

Protein Percentage 84.98%
cDNA percentage 88.41%
Ka/Ks Ratio 0.47387 (Ka = 0.106, Ks = 0.2238)

Additional orthologs identified in other species via the OPTIC pipeline.

LPCAT3 (Human)   Lpcat3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1683 bp    Location:293246..311169   Strand:+
Raw sequence 
>bmy_11473
ATGCTTCCCTTCACTCAGTGGCCACGCTCTCTGGCCAGAGTCTTTTACTGCCTGCTGCCTGGTGTCCACGTCCAGCCTGCATTTCCTCTTGGTCCAGCCCCCCACTTCTTAGCTGGCCCCCAGGTCCCGGCCCCCATGCCCCTCGTGCTGCTGTTTCACGGTTACCCCTTGGCTTTGTTTTATCGGCATTACCTTTTCTACAAGGACAGCTACCTCATCCATCTCTTCCACACCTTTACAGGCCTCTCAATTGCTTATTATAACTTTGGAAACCAGCTCTACCACTCCCTGCTATGCGTCGTGCTTCAGTTCCTCATCCTCCGGCTGATGGGCCGCACCATCACTGCCGTCCTCACTACCTTTTGCTTCCAGATGGCCTACCTTCTTGCCGGATACTATTATACAGCCACTGGCAACTACGATATCAAGTGGACGATGCCACATTGTGTCCTGACCTTGAAGCTGATCGGTCTCGCCATCGACTACTATGATGGAGGGAAAGATCAAAAATCACTGTCCTCTGAGCAACAGAAATACGCCATACGCCATGTCCCTTCCCTGCTGGAGGTTGCTGGCTTCTCCTACTTCTATGGGGCCTTCTTGGTGGGGCCCCAGTTCTCAGTGAACCACTACATGAAGCTGGTGCAGGGACAGCTGACTGACCTACCAGGCAAGATACCAAACAGCACCGTACCTGCTCTCAGGCGCCTGAGTCTGGGCCTTATCTACCTAGTGGGCTACACCCTGCTCAGCCAGCACATCACAGAAGACTATCTCCTCACTGACGACTACGAAAACCACAGCTTCTGGTTCCGCTGCCTGTACATGCTGGTCTGGGGCAAGGTTGTGCTGTACAAATACGTCGCCTGTTGGCTGGTCACGGAAGGCGTGTGCATCCTGACGGGGCTGGGCTTCCACGGCCTTGATGAGCTCGGGAGGGCCAAGTGGGACACCTGCGCCAACATGAAGGTGTGGCTCTTTGAGACAGACCCCCGCTTCACGGGCACCATCGCCTCTTTCAACATCAACACCAACGCCTGGGTGGCCCGTTACTTCTTCAAACGACTCAAGTTCCTTGGAAATAAACAACTATCCCAGGGCCTCTCATTGCTATTCTTGTCCCTCTGGCACGGCCTCCACTCAGGGTACCTGGTCTGCTTTCAGATGGAATTCCTCATTGTTATTGTGGAAAGACAGGCTGCCAGCCTGATTCAAGACAGCCCAGCCCTGAGCAGCCTGGCCTCCATCAGGGTCCTGCAGCCCCTCTACTATCTGGTGCAGCAGACCATCCACTGGCTCTTCATGGGTTACTCGATGACTGCCTTCTGCCTCTTCACGTGGGACAARTGGCTGAAGTCTACTATTCACATTGCCTTATGTTCGCAAAGCAATGGTGCCGAGGAAAGAGAAGTTAAAGAAAATGGAATAATCTATTTCCCTGGTGGCCCAGAGCAGGACTGGTGCAGAAACGACTCGCCTCCCTTTCCACAGCACTCCTTCGTCCCAGAGCACAGAGAACCAGAAGCCAGGGTGCGGGAAGACGGGGCTCCCCCAGCTGTGCCTCTGCTGCCGGCCACGTCTCCATCTGGGGCCAAAGGGGAGACTCTCGTGGGAGGAGTAGAGGGGCCCATTGTCTCCCCTCTGAGCTCCCCCGTGCACGTTGCCTTATCTCTCCCCCTCTAG

Related Sequences

bmy_11473T0 SequenceType object (3)

Length: 561 aa      View alignments
>bmy_11473T0
MLPFTQWPRSLARVFYCLLPGVHVQPAFPLGPAPHFLAGPQVPAPMPLVLLFHGYPLALFYRHYLFYKDSYLIHLFHTFTGLSIAYYNFGNQLYHSLLCVVLQFLILRLMGRTITAVLTTFCFQMAYLLAGYYYTATGNYDIKWTMPHCVLTLKLIGLAIDYYDGGKDQKSLSSEQQKYAIRHVPSLLEVAGFSYFYGAFLVGPQFSVNHYMKLVQGQLTDLPGKIPNSTVPALRRLSLGLIYLVGYTLLSQHITEDYLLTDDYENHSFWFRCLYMLVWGKVVLYKYVACWLVTEGVCILTGLGFHGLDELGRAKWDTCANMKVWLFETDPRFTGTIASFNINTNAWVARYFFKRLKFLGNKQLSQGLSLLFLSLWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPALSSLASIRVLQPLYYLVQQTIHWLFMGYSMTAFCLFTWDKWLKSTIHIALCSQSNGAEEREVKENGIIYFPGGPEQDWCRNDSPPFPQHSFVPEHREPEARVREDGAPPAVPLLPATSPSGAKGETLVGGVEGPIVSPLSSPVHVALSLPL*