Part of scaffold_625 (Scaffold)

For more information consult the page for scaffold_625 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000004810 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004535, Bottlenosed dolphin)

Protein Percentage 83.61%
cDNA percentage 84.02%
Ka/Ks Ratio 0.20487 (Ka = 0.0175, Ks = 0.0852)

BT.26573 ENSBTAG00000013126 (Cow)

Gene Details

ribosomal RNA small subunit methyltransferase NEP1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017445, Cow)

Protein Percentage 95.08%
cDNA percentage 93.44%
Ka/Ks Ratio 0.12755 (Ka = 0.0269, Ks = 0.2111)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 831 bp    Location:317216..311219   Strand:-
>bmy_11474
CCACTTTCAAAATGGCAGACGGAAGGAAGCTTGCGATTGGGGCGAGCGAGAGGCCCTAGTTTAAGGACGTTACACAATTTCCGGTCCGGTTGCAAGATGGCAGCGCCCGGTGGCGGATTCCAACCTCGTGAGCGGCGCGCCGCGGAGCAGGAAGAGGACTGGGAGGCTGTGACGCCCAAGCGGCCCCGACTCGGGGCGGGAAGCAAGATCGGAGGCCGTAGGCTCATTGTGGTGCTGGAAGGGGCCAGTCTGGAGACAGTCAAGGTGGGGAAGACGTATGAGCTGCTCAACTGTGACAAGCACAAGTCCATGTTGCTGAAGAACGGACGGGACCCTGGGGAAGTGAGACCAGACATAGCTCACCAGAGTTTACTGATGCTGATGGACAGTCCCCTGAACCGGGCTGGCTTGCTACAGGTTTATATCCACACGCAGAAGAATGTGCTGATTGAAGTGAACCCCCAGACTCGAATTCCCAGAACCTTTGACCGCTTTTGTGGCCTCATGGTTCAGCTTTTACACAAACTCAGCGTTCGAGCAGCTGACGGCCCCCAGAAGCTCTTGAAGGTGATTAAGAATCCAGTGTCACGTCACTTCCCAGTTGGGTGTATGAAAATCGGCACTTCTTTTTCTGTCCCGGTCATCGGCGATGTGCGGGAGCTGGTGCCCATCAGCGACCCTGTTGTCTTTGTGGTGGGGGCCTTCGCCCATGGCAGGGTGGACGTGGAGTACACAGAGAAGATGGTGTCCATCAGCAACTACCCCCTCTCTGCTGCCCTCACCTGTGCAAAGCTCACCACAGCCTTTGAAGAAGCCTGGGGGGTCATTTGA

Related Sequences

bmy_11474T0 Protein

Length: 277 aa      View alignments
>bmy_11474T0
PLSKWQTEGSLRLGRARGPSLRTLHNFRSGCKMAAPGGGFQPRERRAAEQEEDWEAVTPKRPRLGAGSKIGGRRLIVVLEGASLETVKVGKTYELLNCDKHKSMLLKNGRDPGEVRPDIAHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSRHFPVGCMKIGTSFSVPVIGDVRELVPISDPVVFVVGAFAHGRVDVEYTEKMVSISNYPLSAALTCAKLTTAFEEAWGVI*