Sequence detailsbmy_11476 (Coding sequence)

Part of scaffold_625 (SequenceType object (1))

For more information consult the page for scaffold_625 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPN6ENSBTAG00000020294 (Cow)

Gene Details

tyrosine-protein phosphatase non-receptor type 6

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000027046, Cow)

Protein Percentage 95.28%
cDNA percentage 92.36%
Ka/Ks Ratio 0.05997 (Ka = 0.0262, Ks = 0.4375)

PTPN6 (Minke Whale)

Gene Details

protein tyrosine phosphatase, non-receptor type 6

External Links

Gene match (Identifier: BACU003066, Minke Whale)

Protein Percentage 96.81%
cDNA percentage 96.97%
Ka/Ks Ratio 0.17987 (Ka = 0.0188, Ks = 0.1047)

Additional orthologs identified in other species via the OPTIC pipeline.

PTPN6 (Human)   Ptpn6 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1983 bp    Location:341464..325976   Strand:-
Raw sequence 
>bmy_11476
GCCTGGCGGGCAGCATCGAGAGGAAAGTGGCTGAGTTCTGAGTGTTCTTCCTTACCTTGGGCCACCGCACAGCTGCGCCACGGGCTCAGCCCCGCCCCCTGTGGCCATCTGCCTGTGACTCCCTACCCCTCTCGGGAAATGCTGTCCCATGGGTGGTTTCACCGAGACCTCAGTGGGCTGGATGCCGAGACCCTGCTCAAGGGCCGAGGGGTCAACGGGAGCTTCCTGGCTCGGCCCAGTCGCAAGAACCAGGGCGACTTCTCCCTCTCCGTCAGGGTGGGGGATCAGGTGACCCACATAAGGATCCAGAACTCGGGGGATTTCTACGACCTGTATGGAGGGGAGAAGTTCGCGACGCTGACGGAGCTGGTGGAGTACTACACGCAGCAGCAGGGCGTCCTGCAGGACCGCGATGGCACCATCATCCACCTCAAGTACCCGCTGAACTGCTCAGACCCCACCAGTGAGAGGTGGTACCATGGCCACATGTCTGGAGGGCAGGCAGAGACACTGCTGCAGGCCAAGGGTGAGCCCTGGACTTTTCTCGTGCGTGAAAGTCTCAGCCAGCCTGGAGATTTTGTGCTGTCCGTGCTCAGCGACCAGCCAAAGGCTGGGCCGGGCTCCCCGCTCAGAGTCACCCATATCAAGGTCATGTGTGAGGGTGGACGCTACACAGTGGGTGGTTCAGAGACCTTCGACAGCCTCACGGATCTGGTGGAGCATTTCAAGAGGACGGGGATCGAGGAGGCCTCGGGCGCCTTCGTCTACCTGCGGCAGCCATACTACGCCACGAGGGTGAACGCAGCTGACATTGAGAACCGGGTCTTGGAACTGAACAAGAAGCAGGAGTCGGAGGACACAGCCAAGGCTGGCTTCTGGGAGGAGTTTGAGAGTCTGCAGAAGCAGGAGGTGAAGAACTTGCACCAGCGGCTGGAAGGGCAGCGGCCAGAAAACAAGAGCAAGAACCGTTACAAGAACATCCTTCCGTTCGACCACAGCCGAGTGGTCCTGCAGGGACGCGACAGTAACATCCCTGGGTCCGACTACATTAACGCCAACTACGTCAAGAACCAGCTGCTAGGCCCGGATGAGAATGCTAAGACCTACATCGCCAGCCAGGGCTGCCTGGAGGCCACGGTCCTCGACTTCTGGCAGATGGTGTGGCAGGAGAACACCCGTGTCATCGTCATGACCACCCGGGAGGTGGAGAAGGGCCGGAACAAATGTGTCCCATACTGGCCAGAGGTGGGCACTCAGCGCGTTTATGGACTCTACGCTGTAACCAACTGCGGGGAACACGACACAGCTGAGTACAAACTCCGCACCTTACAGGTCTCCCCGCTGGACAATGGGGACCTGGTTCGGGAGATCTGGCACTACCAGTACCTGAGCTGGCCTGACCACGGGGTCCCCAGCGAGCCTGGGGGTGTCCTCAGCTTCCTGGACCAGATCAACCAGCGGCAGGAAATGCCCCCAACTCAGCCCTTGGGCTCATGCACCACTAGCTCCACTGGAGACCCTCATGTTCATGGTCAGGAGACCCCGTTCCTGCTAAGCGCCGGCATCGGCCGCACCGGCACCATCATTGTCATCGACATGCTTATGGAGAGCATCTCCACCAAGGGCCTGGACTGTGACATCGACATCCAGAAGACGATCCAGATGGTACGGGCCCAGCGCTCGGGCATGGTGCAGACGGAGGCGCAGTACAAGTTCATCTACGTGGCCATCGCCCAGTTCATCGAAACCACCAAGAAGAAGCTGGAGGTCATGCAGTCCCAGAAGGGCCGGGAGTCGGAGTACGGGAACATTACCTACCCCCCAGCCATGAAGAATGCCCATGCCAAGGCCGCCCGCACCTCCTCCAAACACAAGGAGGACGTGTATGAGAACGTGCACGGTAAGAACAAGAGAGAGGAGAAGGTGAAGAAGCAGCGGTCAGCCGACAAGGAGAAGAGCAAGGGTTCCCTGAAGAGGAAGTGA

Related Sequences

bmy_11476T0 SequenceType object (3)

Length: 661 aa      View alignments
>bmy_11476T0
AWRAASRGKWLSSECSSLPWATAQLRHGLSPAPCGHLPVTPYPSREMLSHGWFHRDLSGLDAETLLKGRGVNGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGSETFDSLTDLVEHFKRTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKSKNRYKNILPFDHSRVVLQGRDSNIPGSDYINANYVKNQLLGPDENAKTYIASQGCLEATVLDFWQMVWQENTRVIVMTTREVEKGRNKCVPYWPEVGTQRVYGLYAVTNCGEHDTAEYKLRTLQVSPLDNGDLVREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQEMPPTQPLGSCTTSSTGDPHVHGQETPFLLSAGIGRTGTIIVIDMLMESISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETTKKKLEVMQSQKGRESEYGNITYPPAMKNAHAKAARTSSKHKEDVYENVHGKNKREEKVKKQRSADKEKSKGSLKRK*