Part of scaffold_625 (Scaffold)

For more information consult the page for scaffold_625 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TPI1 ENSTTRG00000004742 (Bottlenosed dolphin)

Gene Details

triosephosphate isomerase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004469, Bottlenosed dolphin)

Protein Percentage 97.04%
cDNA percentage 97.53%
Ka/Ks Ratio 0.21687 (Ka = 0.0133, Ks = 0.0612)

TPI1 ENSBTAG00000019782 (Cow)

Gene Details

Triosephosphate isomerase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026358, Cow)

Protein Percentage 97.02%
cDNA percentage 95.32%
Ka/Ks Ratio 0.08325 (Ka = 0.0136, Ks = 0.1629)

TPI1  (Minke Whale)

Gene Details

triosephosphate isomerase 1

External Links

Gene match (Identifier: BACU003071, Minke Whale)

Protein Percentage 94.07%
cDNA percentage 96.84%
Ka/Ks Ratio 1.31436 (Ka = 0.0331, Ks = 0.0252)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 819 bp    Location:399333..395598   Strand:-
>bmy_11482
ATGGCAGAGGACCCGCGGGGGGCGGAGTTCTGCCTCTCCGCGCTCTATATAAGCGGCCAGTGGCAGCGGCTGCGCGCTGCTTGTGACCTTCAGTGTGCCGGCTTCGTCGCAATGGCGCCCTCCAGGAAGTTCTTCGTGGGGGGGAACTGGAAGATGAACGGGCGGAAGAACAATCTGGGGGAGCTCATCAACACTCTGAACGCGGCCAAGGTGCCGGCCGACACCGAGGTGGTTTGCGCACCCCCCACCGTCTTCATTGACTTCGCCCGGCAGAAGCTAGATCCCAAGATTGCAGTGGCTGCGCAGAACTGCTACAAAGTGGCTAATGGGGCCTTTACGGGGGAGATCAGCCCTGGCATGATCAAAGACTGTGGAGCCACGTGGGTAGTCCTGGGGCACTCGGAGAGAAGGCATGTCTTTGGGGAGTCAGATGAGCTGATTGGGCAGAAGGTGGCTCACGCCCTGGCAGAGGRACTTGGAGTAATCGCCTGCATTGGGGAGAAGCTAGATGAGAGGGAAGCTGGCATCACTGAGAAGGTTGTTTTCGAGCAAACCAAGGTCATCGCAGATAATGTGAAGGACTGGGGCAAGGTTGTCCTGGCCTATGAGCCTGCCCAGGAAGTACACGAAAAGCTCCGGGGATGGCTTAAGTCCAACATCTCTGATGCAGTGGCTCAGAGCACCCGCATCATTTATGGGGGTTCTGTGACTGGGGCAACCTGCAAGGAGCTAGCAAGCCAGCCTGATGTGGATGGCTTCCTTGTGGGGGGTGCTTCCCTCAAGCCTGAATTCGTGGACATCATCAATGCCAAACAATAA

Related Sequences

bmy_11482T0 Protein

Length: 273 aa      View alignments
>bmy_11482T0
MAEDPRGAEFCLSALYISGQWQRLRAACDLQCAGFVAMAPSRKFFVGGNWKMNGRKNNLGELINTLNAAKVPADTEVVCAPPTVFIDFARQKLDPKIAVAAQNCYKVANGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEXLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWGKVVLAYEPAQEVHEKLRGWLKSNISDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINAKQ*