Sequence details bmy_11483 (Coding sequence)

Part of scaffold_625 (Scaffold)

For more information consult the page for scaffold_625 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP5 ENSTTRG00000004729 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 5 (isopeptidase T)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004461, Bottlenosed dolphin)

Protein Percentage 87.13%
cDNA percentage 87.29%
Ka/Ks Ratio 0.23286 (Ka = 0.0299, Ks = 0.1284)

USP5 ENSBTAG00000019780 (Cow)

Gene Details

ubiquitin carboxyl-terminal hydrolase 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026356, Cow)

Protein Percentage 95.47%
cDNA percentage 92.61%
Ka/Ks Ratio 0.08167 (Ka = 0.027, Ks = 0.3311)

Additional orthologs identified in other species via the OPTIC pipeline.

USP5 (Human)   Usp5 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2784 bp    Location:413598..400664   Strand:-
Raw sequence 
>bmy_11483
ATGGCGGAGCTGAGTGAGGAGGCGCTGCTGTCAGTATTACCGACTATCCGGGTCCCCAAGGCTGGAGACCGGGTCCACAAAGACGAGTGCGCCTTCTCCTTCGACACACCGTATGTGGAGAGACATTTCAACAAGACGGGCCAGCGAGTCTACCTGCACCTCCGCCGGACCCGGCGCCCGAAAGAGGAAGACACAACTGCGAGCACTGGAGACCCTCCCCGCAAGAAGCCCACCCGTCTGGCTATCGGTGTCGAAGGCGGGTTTGACCTCAGCGAGGAGAAGTTTGAATACGATGAGGATGTAAAAATCATCATTTTGCCGGATTACCTGGAGATAGCCCGGGATGGGTTGGGGGGACTGCCTGACATTGTCAGAGATCGGGTGACCAGTGCGGTGGAGGCCCTACTGTCGGCCGACTCAGCCTCCCGCAAGCAGGAGGTGCAGGCCTGGGATGGGGAAGTACGGCAGGTGTCTAAGCATGCCTTCAACCTCAAGCAGCTGGACAGCCCTGCTCGAATCCCTCCCTGTGGCTGGAAGTGCTCCAAGTGCGACATGAGGGAGAACCTGTGGCTCAACCTGACCGACGGCTCCATCCTCTGTGGCCGGCGCTACTTCGACGGCAGCGGCGGCAACAACCACGCCGTGGAGCACTACCGCGAGTCGGGCTACCCGCTAGCCGTCAAGCTGGGCACCATCACGCCCGACGGAGCTGGTACCACCCCCGCCCCCGGCCGCCCGCCTCCACGCGGAAACCCCTGGGTCTTAACCGTCAACTCATTTCACGTGACACGAACGAGACGCGAAACGTTACCTATAGGGTGGAGACACGATGAATCCAGCCCTTATCCTGTTTCACCCCATCTTCCCGGACAGCCAGTCCCAGAAGGGCTTACGGCCTCACTGATGCTCGAGGGAGCCAAGAGCGTTGCCCTCACGGCTCGTCCTTCTGTCCCACCGAGGCCTCTCAGGGCAGGGGGTGGGGTTGGTGGTAAGGCTGGGCCTGAGCCGCCCCCTCTGACACCGCTCCTGCGTCCTGTGCTAGACGTGTACTCATATGACGAGGATGACATGACGGACAAGACGATGACGGAGTTGGAGATAGACATGAACCAGCGCATCGGCGAGTGGGAGCTGATCCAGGAGTCGGGGGTGCCGCTCAAGCCCCTGTTCGGGCCCGGCTACACAGGCATCCGCAACCTGGGCAACAGCTGCTACCTCAACTCGGTGGTCCAGGTGCTCTTCAGCATCCCCGACTTCCAGAGGAAATATGTGGATAAGCTGGAGAAGATCTTCCAGAACGCCCCGACGGACCCTACCCAGGATTTCAGCACCCAGGTGGCCAAGCTGGGCCATGGCCTTCTCTCGGGAGAGTACTCCAAGCCAGCACCAGAGTCGGGCGATGGGGAGCAGGTGCCAGAACAAAAGGAAGTCCAAGATGGCCTCGCCCCTCGGATGTTCAAGGCCCTCATCGGCAAGGGTCACCCCGAGTTCTCCACCAACCGGCAGCAGGATGCCCAAGAGTTCTTCCTTCACCTTATCAACATGGTGGAGCGGAATTGCCGGAGCTCTGAAAATCCTAATGAAGTGTTCCGCTTCCTGGTGGAGGAAAAGATCAAGTGCCTGGCAACAGAGAAGGTGAAGTACACCCAGCGAGTGGACTACATCATGCAGCTGCCTGTGCCCATGGACGCGGCCCTGAACAAAGAGGAGCTCCTGGAGTACGAGGAGAAGAAGCGGCAAGCCGAAGAGGAGAAGCTGCCACTGCCAGAACTGGTTCGGGCCCAGGTGCCCTTCAGTTCCTGCCTGGAGGCCTATGGGGCCCCCGAGCAGGTGGATGACTTCTGGAGCACGGCCCTGCAGGCCAAATCAGTAGCCGTCAAGACCACACGATTTGCCTCATTCCCTGACTACCTGGTCATCCAGATCAAGAAGTTCACCTTCGGCTTAGACTGGGTGCCCAAGAAACTGGATGTATCCATCGAGATGCCAGAGGAGCTAGACATCTCCCAGCTGAGGGGCACAGGGCTGCAGCCTGGAGAGGAGGAGCTGCCCGACATTGCCCCACCCCTGGTCACTCCGGATGAGCCCAAAGGTAGCCTTGGTTTCTATGGCAACGAAGACGAAGACTCCTTCTGCTCCCCTCACTTCTCCTCTCCGACATCGCCCATGTTGGATGAATCGGTCATCATCCAGCTGGTGGAGATGGGCTTCCCGATGGACGCCTGCCGCAAAGCCGTCTACTACACGGGCAACAGCGGGGCCGAGGCTGCCATGAACTGGGTCATGTCACACATGGATGATCCAGATTTTGCAAACCCCCTCATCCTGCCTGGCTCCAGCGGGCCCGGCTCCACAAGCGCAGCAGCTGACCCCCCGCCAGAGGACTGTGTGACCACCATCGTCTCCATGGGCTTCTCCCGGGACCAGGCCCTGAAAGCCCTGCGGGCCACGAATAATAGTTTAGAACGGGCTGTGGACTGGATCTTCAGTCACATAGACGACCTGGACGCAGAAGCTGCCATGGACATCTCCGAGGGCCGCTCAGCTGCCGACTCCATCTCCGAGTCCATACCGGTGGGACCTAAAGTCCGGGACGGTCCTGGAAAGTATCAGCTCTTCGCCTTCATTAGTCACATGGGCACCTCAACCATGTGTGGTCACTACGTCTGCCACATCAAGAAGGAAGGCAGATGGGTGATCTACAATGACCAGAAAGTGTGTGCCTCTGAGAAGCCGCCCAAGGACCTGGGCTACATCTACTTCTACCAGAGAGTGGCCAGCTAA

Related Sequences

bmy_11483T0 Protein

Length: 928 aa      View alignments
>bmy_11483T0
MAELSEEALLSVLPTIRVPKAGDRVHKDECAFSFDTPYVERHFNKTGQRVYLHLRRTRRPKEEDTTASTGDPPRKKPTRLAIGVEGGFDLSEEKFEYDEDVKIIILPDYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSKHAFNLKQLDSPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRESGYPLAVKLGTITPDGAGTTPAPGRPPPRGNPWVLTVNSFHVTRTRRETLPIGWRHDESSPYPVSPHLPGQPVPEGLTASLMLEGAKSVALTARPSVPPRPLRAGGGVGGKAGPEPPPLTPLLRPVLDVYSYDEDDMTDKTMTELEIDMNQRIGEWELIQESGVPLKPLFGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTDPTQDFSTQVAKLGHGLLSGEYSKPAPESGDGEQVPEQKEVQDGLAPRMFKALIGKGHPEFSTNRQQDAQEFFLHLINMVERNCRSSENPNEVFRFLVEEKIKCLATEKVKYTQRVDYIMQLPVPMDAALNKEELLEYEEKKRQAEEEKLPLPELVRAQVPFSSCLEAYGAPEQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEELDISQLRGTGLQPGEEELPDIAPPLVTPDEPKGSLGFYGNEDEDSFCSPHFSSPTSPMLDESVIIQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSGPGSTSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAADSISESIPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCASEKPPKDLGYIYFYQRVAS*