Part of scaffold_625 (Scaffold)

For more information consult the page for scaffold_625 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CD4 ENSTTRG00000004621 (Bottlenosed dolphin)

Gene Details

CD4 molecule

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004366, Bottlenosed dolphin)

Protein Percentage 84.51%
cDNA percentage 90.2%
Ka/Ks Ratio 0.58076 (Ka = 0.0924, Ks = 0.1592)

CD4 ENSBTAG00000003255 (Cow)

Gene Details

T-cell surface glycoprotein CD4 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000037566, Cow)

Protein Percentage 66.49%
cDNA percentage 78.18%
Ka/Ks Ratio 0.46667 (Ka = 0.2223, Ks = 0.4764)

CD4  (Minke Whale)

Gene Details

CD4 molecule

External Links

Gene match (Identifier: BACU003074, Minke Whale)

Protein Percentage 89.27%
cDNA percentage 92.76%
Ka/Ks Ratio 0.55636 (Ka = 0.0661, Ks = 0.1188)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1182 bp    Location:449600..445628   Strand:-
>bmy_11487
ATCAGCAGAGTTGTGGGCACCGCCCTTGCCAGGGGGTGCCGTGCCTCCAGGGTACCCCAACCTCCTCAATACGGTGGCGTTCTACTCCCAGGTGCCTCCAACCTGAACTCTCGAGTCGAATCAAAAAGAAACCTGTGGGACCAAGGATACTTTCCTCTGGTCATCAAGGATCTTGAAGTACCTGACTCGGGGACTTACATCTGCGAAGTGGAGGACAAGAGGATCGAGGTGGAATTGCAAGTGTTCAGATTGACTGCCAGCTCGGACACCCACTTGCTGCTGGGACAGAGCCTGACCATGACCTTGAAAGGCCCCTCTGGTAGTAACCCTTCAGTGCAATGGAAAGGTCCAGGGAATACAAGGACGAATGAGGCCAAGAGTCTGTCACTGCCCCAGGTGGGGTTGCAGGACAGTGGCACCTGGACATGTACCGTCTCCCAGGACCAGCAGACGCTGGTGTTCAGCAAACACATCCTGGTGCTGGCCTTCCAGGAGGTCTCCAGCACAGTCTATGCAAAGGAGGGGGAGCAGGTGAACTTTTCCTTCCCACTCACATTCAAAGATGAAAATCTGAGCGGGGAGCTGTGTTGGCTGCAGGCAAAGGGGAATTCCTCCCCCCAGTCCTGGATCACCTTCACCTTGAAGAACAGGAAGGTGACTGTGGAAAAGGCTCGCAAGGACCTCAAGCTGCACATGAGCAATGAACTCCCGCTCCACCTCACTCTGCCCCGGGCTTTGCCGCAGTACGCAGGTTCTGGAAACCTGACCCTGGATCTCACCAAGGGGAAGTTGTATCAGGAAGTGAACCTCGTTGTCATGAGAGTGACTAAGTCCCAAAACAGTTTGACCTGTGAGGTGCTGGGACCCACCTCCCCCAGGCTGACACTGAGCTTGAAGATGGAGAACCAGAGTATGAGGGTCTCAAATCAGCAGAAGCTGGTGACGGTGCTGGGCCCTGAAGCAGGGACGTGGCGGTGTCTACTGAGCGACAAGGGCAAAGTCCTGCTGGAATCCAAGGTCAAGACGGGCAGGGAGCTGAGCACAGCTCTCTCTCTTGCAGTTTTGCCCCCAGTGCTCACCCACGCCTGGCCGAAGCTTCTGGCTGTGGTGCTGGGGGGGATCACCGGCCTTCTGCTTCTCATTGGATTTTGCATCTTCTCTGTTAAATGCTGGCACCGCAGG

Related Sequences

bmy_11487T0 Protein

Length: 394 aa      View alignments
>bmy_11487T0
ISRVVGTALARGCRASRVPQPPQYGGVLLPGASNLNSRVESKRNLWDQGYFPLVIKDLEVPDSGTYICEVEDKRIEVELQVFRLTASSDTHLLLGQSLTMTLKGPSGSNPSVQWKGPGNTRTNEAKSLSLPQVGLQDSGTWTCTVSQDQQTLVFSKHILVLAFQEVSSTVYAKEGEQVNFSFPLTFKDENLSGELCWLQAKGNSSPQSWITFTLKNRKVTVEKARKDLKLHMSNELPLHLTLPRALPQYAGSGNLTLDLTKGKLYQEVNLVVMRVTKSQNSLTCEVLGPTSPRLTLSLKMENQSMRVSNQQKLVTVLGPEAGTWRCLLSDKGKVLLESKVKTGRELSTALSLAVLPPVLTHAWPKLLAVVLGGITGLLLLIGFCIFSVKCWHRR