Sequence detailsbmy_11487 (Coding sequence)

Part of scaffold_625 (SequenceType object (1))

For more information consult the page for scaffold_625 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CD4ENSTTRG00000004621 (Bottlenosed dolphin)

Gene Details

CD4 molecule

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004366, Bottlenosed dolphin)

Protein Percentage 84.51%
cDNA percentage 90.2%
Ka/Ks Ratio 0.58076 (Ka = 0.0924, Ks = 0.1592)

CD4ENSBTAG00000003255 (Cow)

Gene Details

T-cell surface glycoprotein CD4 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000037566, Cow)

Protein Percentage 66.49%
cDNA percentage 78.18%
Ka/Ks Ratio 0.46667 (Ka = 0.2223, Ks = 0.4764)

CD4 (Minke Whale)

Gene Details

CD4 molecule

External Links

Gene match (Identifier: BACU003074, Minke Whale)

Protein Percentage 89.27%
cDNA percentage 92.76%
Ka/Ks Ratio 0.55636 (Ka = 0.0661, Ks = 0.1188)

Additional orthologs identified in other species via the OPTIC pipeline.

CD4 (Human)   Cd4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1182 bp    Location:449600..445628   Strand:-
Raw sequence 
>bmy_11487
ATCAGCAGAGTTGTGGGCACCGCCCTTGCCAGGGGGTGCCGTGCCTCCAGGGTACCCCAACCTCCTCAATACGGTGGCGTTCTACTCCCAGGTGCCTCCAACCTGAACTCTCGAGTCGAATCAAAAAGAAACCTGTGGGACCAAGGATACTTTCCTCTGGTCATCAAGGATCTTGAAGTACCTGACTCGGGGACTTACATCTGCGAAGTGGAGGACAAGAGGATCGAGGTGGAATTGCAAGTGTTCAGATTGACTGCCAGCTCGGACACCCACTTGCTGCTGGGACAGAGCCTGACCATGACCTTGAAAGGCCCCTCTGGTAGTAACCCTTCAGTGCAATGGAAAGGTCCAGGGAATACAAGGACGAATGAGGCCAAGAGTCTGTCACTGCCCCAGGTGGGGTTGCAGGACAGTGGCACCTGGACATGTACCGTCTCCCAGGACCAGCAGACGCTGGTGTTCAGCAAACACATCCTGGTGCTGGCCTTCCAGGAGGTCTCCAGCACAGTCTATGCAAAGGAGGGGGAGCAGGTGAACTTTTCCTTCCCACTCACATTCAAAGATGAAAATCTGAGCGGGGAGCTGTGTTGGCTGCAGGCAAAGGGGAATTCCTCCCCCCAGTCCTGGATCACCTTCACCTTGAAGAACAGGAAGGTGACTGTGGAAAAGGCTCGCAAGGACCTCAAGCTGCACATGAGCAATGAACTCCCGCTCCACCTCACTCTGCCCCGGGCTTTGCCGCAGTACGCAGGTTCTGGAAACCTGACCCTGGATCTCACCAAGGGGAAGTTGTATCAGGAAGTGAACCTCGTTGTCATGAGAGTGACTAAGTCCCAAAACAGTTTGACCTGTGAGGTGCTGGGACCCACCTCCCCCAGGCTGACACTGAGCTTGAAGATGGAGAACCAGAGTATGAGGGTCTCAAATCAGCAGAAGCTGGTGACGGTGCTGGGCCCTGAAGCAGGGACGTGGCGGTGTCTACTGAGCGACAAGGGCAAAGTCCTGCTGGAATCCAAGGTCAAGACGGGCAGGGAGCTGAGCACAGCTCTCTCTCTTGCAGTTTTGCCCCCAGTGCTCACCCACGCCTGGCCGAAGCTTCTGGCTGTGGTGCTGGGGGGGATCACCGGCCTTCTGCTTCTCATTGGATTTTGCATCTTCTCTGTTAAATGCTGGCACCGCAGG

Related Sequences

bmy_11487T0 SequenceType object (3)

Length: 394 aa      View alignments
>bmy_11487T0
ISRVVGTALARGCRASRVPQPPQYGGVLLPGASNLNSRVESKRNLWDQGYFPLVIKDLEVPDSGTYICEVEDKRIEVELQVFRLTASSDTHLLLGQSLTMTLKGPSGSNPSVQWKGPGNTRTNEAKSLSLPQVGLQDSGTWTCTVSQDQQTLVFSKHILVLAFQEVSSTVYAKEGEQVNFSFPLTFKDENLSGELCWLQAKGNSSPQSWITFTLKNRKVTVEKARKDLKLHMSNELPLHLTLPRALPQYAGSGNLTLDLTKGKLYQEVNLVVMRVTKSQNSLTCEVLGPTSPRLTLSLKMENQSMRVSNQQKLVTVLGPEAGTWRCLLSDKGKVLLESKVKTGRELSTALSLAVLPPVLTHAWPKLLAVVLGGITGLLLLIGFCIFSVKCWHRR