Part of scaffold_625 (Scaffold)

For more information consult the page for scaffold_625 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHD4 ENSTTRG00000016102 (Bottlenosed dolphin)

Gene Details

chromodomain helicase DNA binding protein 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015268, Bottlenosed dolphin)

Protein Percentage 95.59%
cDNA percentage 94.31%
Ka/Ks Ratio 0.03016 (Ka = 0.0018, Ks = 0.0606)

CHD4 ENSBTAG00000014734 (Cow)

Gene Details

chromodomain-helicase-DNA-binding protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019612, Cow)

Protein Percentage 99.16%
cDNA percentage 94.3%
Ka/Ks Ratio 0.01346 (Ka = 0.0037, Ks = 0.2747)

CHD4  (Minke Whale)

Gene Details

chromodomain helicase DNA binding protein 4

External Links

Gene match (Identifier: BACU003081, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.37%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0213)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5823 bp    Location:624105..655037   Strand:+
>bmy_11497
ATGGCGTCGGGCCTGGGCTCCCCGTCCCCCTGCTCAGCGGGCAGCGAGGAGGAGGATATGGATGCACTTTTGAACAACAGCTTGCCCCCTCCCCACCCAGAAAACGAAGAGGACCCGGAAGAGGATTTGTCAGAAGCGGAGACTCCAAAGCTCAAGAAAAAGAAAAAGCCTAAGAAGCCTCGGGACCCTAAAATCCCTAAGAGCAAGCGCCAAAAAAAGGAGCGTATGCTCTTATGCCGGCAGCTGGGGGACAGCTCTGGGGAGGGGCCGGAGTTTGTGGAGGAGGATGAAGAGGTGGCTCTGCGCTCAGACAGTGAGGGCAGCGACTATACCCCTGGCAAGAAGAAGAAGAAGAAGCTCGGACCTAAGAAAGAAAAGAAGAGTAAGTCCAAGCGGAAAGAGGAAGAGGAGGAGGATGACGAAGACGATGATTCAAAGGAGCCTAAATCATCTGCTCAGCTCCTGGAAGACTGGGGCATGGAAGACATTGACCATGTGTTCTCAGAGGAGGATTATCGCACCCTCACCAACTACAAGGCCTTCAGCCAGTTTGTCCGACCCCTCATTGCTGCCAAAAACCCCAAGATTGCTGTCTCCAAGATGATGATGGTTTTGGGTGCGAAGTGGCGGGAGTTCAGCACCAATAACCCCTTCAAAGGCAGTTCTGGGGCTTCCGTGGCAGCAGCAGCAGCTGCGGCAGTGGCCGTGGTGGAGAGCATGGTGACGGCCACTGAAGTTGCACCTCCTCCGCCCCCTGTGGAGGTGCCTATCCGCAAGGCCAAGACCAAGGAGGGCAAAGGTCCCAATGCTCGGAGGAAGCCCAAGGGCAGCCCTCGTGTCCCTGATGCCAAGAAGCCTAAGCCCAAGAAAGTGGCTCCCCTGAAAATCAAGCTGGGAGGTTTCGGTTCTAAGCGTAAGAGATCCTCGAGTGAGGATGACGACTTAGATGTGGAGTCTGACTTCGATGACGCCAGTATCAATAGCTACTCTGTTTCTGATGGTTCTACCAGCCGCAGTAGCCGCAGCCGCAAGAAACTCCGGACCACGAAAAAGAAAAAGAAAGGCGAGGAGGAGGTGACTGCTGTGGATGGTTATGAGACAGACCACCAGGACTATTGTGAGGTGTGCCAGCAAGGCGGAGAGATCATCCTGTGTGATACCTGTCCCCGAGCTTACCACATGGTCTGCCTGGATCCGGATATGGAGAAGGCTCCCGAGGGCAAGTGGAGCTGCCCACACTGCGAGAAGGAAGGCATCCAGTGGGAGGCTAAAGAGGACAATTCGGAGGGTGAGGAGATCCTGGAAGAGGTTGGGGGAGACCCTGAAGAGGAGGATGACCACCATATGGAGTTCTGTCGGGTCTGCAAGGATGGGGGGGAGCTGCTCTGCTGTGACGCCTGTCCTTCTTCCTACCACATCCACTGCCTGAACCCGCCCCTTCCAGAGATCCCCAACGGAGAATGGCTCTGCCCTCGCTGTACGTGTCCAGCTCTTAAGGGCAAAGTTCAGAAGATCCTAATCTGGAAGTGGGGTCAGCCACCATCTCCCACACCAGTGCCTCGGCCCCCAGATGCTGATCCCAATACTCCGTCCCCCAAGCCCTTGGAGGGGCGGCCAGAGCGGCAGTTCTTTGTGAAATGGCAAGGCATGTCGTACTGGCACTGCTCCTGGGTGTCTGAACTGCAGTTGGAGCTGCACTGTCAAGTGATGTTCCGAAACTATCAGCGGAAGAATGATATGGATGAGCCACCCTCTGGGGACTTTGGTGGTGATGAAGAGAAGAGCCGAAAGCGGAAGAATAAGGACCCTAAATTTGCAGAGATGGAGGAACGCTTCTATCGCTACGGGATAAAACCTGAGTGGATGATGATCCACCGAATTCTCAACCACAGCGTGGACAAGAAGGGCCATGTCCACTACTTGATCAAGTGGCGGGACTTGCCCTATGATCAGGCATCCTGGGAGAGTGAGGATGTGGAGATACAGGACTACGACCTGTTCAAGCAGAGCTATTGGAATCACAGGGAGTTGATGAGGGGTGAGGAAGGACGACCAGGCAAGAAGCTCAAGAAGGTGAAGCTGAGGAAGTTGGAGAGGCCCCCTGAAACCCCAACGGTTGACCCAACAGTGAAATATGAGCGACAACCAGAGTACCTGGACGCTACAGGTGGAACCCTGCACCCCTATCAGATGGAGGGTTTGAACTGGTTGCGCTTCTCCTGGGCTCAAGGCACTGACACCATCTTGGCTGACGAGATGGGCCTTGGGAAGACCGTTCAGACCGCAGTCTTCCTCTACTCCCTCTACAAGGAGGGTCATTCCAAAGGCCCCTTCCTAGTGAGTGCCCCTCTTTCTACCATCATCAACTGGGAGCGGGAGTTTGAAATGTGGGCCCCAGATATGTATGTGGTGACTTACGTGGGTGACAAAGACAGCCGTGCCATCATCCGAGAGAATGAGTTCTCCTTTGAGGACAATGCCATTCGTGGCGGCAAGAAGGCTTCCCGCATGAAGAAAGAGGCATCTGTGAAGTTCCACGTGCTGCTGACGTCCTATGAGTTGATCACCATTGACATGGCCATCCTGGGCTCTATTGACTGGGCCTGCCTCATCGTGGATGAAGCCCATCGGCTCAAGAACAATCAGTCTAAGTTCTTCCGGGTCTTAAACGGTTACTCGCTCCAGCACAAGCTCTTGCTGACAGGGACTCCATTACAGAACAACCTGGAAGAGCTGTTTCACCTGCTCAACTTCCTCACCCCTGAGAGGTTCCACAATTTGGAGGGCTTCTTGGAGGAGTTCGCTGACATTGCCAAGGAGGACCAGATTAAAAAACTGCATGACATGCTGGGGCCTCACATGTTGCGGCGGCTCAAAGCTGACGTGTTCAAGAACATGCCTTCCAAGACAGAACTGATTGTGCGTGTGGAGTTGAGCCCTATGCAGAAGAAATACTACAAGTACATCCTCACTCGAAACTTTGAAGCGCTCAATGCTCGAGGTGGCGGCAACCAGGTCTCTTTGCTAAATGTCGTGATGGATCTTAAAAAGTGCTGCAACCACCCGTATCTTTTCCCCGTGGCTGCAATGGAAGCCCCTAAGATGCCTAATGGCATGTATGATGGCAGTGCCCTAATCAGAGCATCTGGGAAATTATTGCTGCTTCAGAAGATGCTCAAGAACCTTAAGGAGGGTGGGCACCGTGTACTCATCTTCTCCCAGATGACCAAGATGCTGGACCTGCTAGAGGATTTCTTGGAACATGAAGGTTATAAATATGAACGTATTGATGGTGGAATCACTGGGAACATGCGTCAGGAGGCCATTGACCGCTTCAATGCACCAGGCGCTCAGCAGTTCTGCTTCTTGCTTTCTACTCGAGCTGGGGGCCTTGGAATCAATCTGGCCACTGCTGACACGGTTATTATCTATGACTCTGACTGGAACCCCCATAATGACATCCAGGCCTTTAGCAGAGCTCACCGTATTGGGCAAAATAAGAAGGTGATGATCTATCGGTTTGTGACCCGTGCGTCAGTAGAAGAGCGCATCACGCAGGTGGCAAAGAAGAAGATGATGCTGACGCATCTAGTTGTTCGGCCTGGGCTGGGCTCCAAGACTGGATCCATGTCCAAACAGGAGCTTGATGACATCCTCAAGTTTGGCACTGAGGAGCTATTCAAGGACGAAGCCACAGATGGAGGAGGAGACAACAAAGAGGGAGAAGACAGCAGTGTTATCCACTATGACGATAAGGCCATTGAACGACTGCTGGACCGGAACCAGGATGAGACAGAAGATACGGAATTGCAGGGCATGAATGAATATTTGAGCTCATTCAAAGTGGCCCAGTATGTGGTGCGAGAAGAAGAAATGGGGGAGGAAGAGGAGGTAGAACGGGAAATCATAAAACAGGAAGAAAGTGTGGATCCTGACTACTGGGAGAAATTGCTGCGGCACCATTATGAGCAGCAGCAGGAAGATCTGGCCCGCAATCTGGGCAAAGGAAAAAGAATCCGTAAACAGGTCAACTACAATGATGGCTCCCAGGAGGACCGAGGTGTGTGTGGCCGGCCCCGCCCCCCACCCATGGGCCGTTCCACTAGAGCAGTGGGCCCCGCTCATCTGCCCTCTCTCCCTCCAGATTGGCAGGACGACCAGTCCGACAACCAGTCCGATTATTCAGTGGCCTCAGAGGAAGGTGATGAAGACTTTGATGAACGTTCAGAAGCTCCCCGCAGGCCCAGTCGCAAGGGCCTGCGGAATGATAAAGATAAGCCATTGCCTCCTCTGTTGGCCCGTGTTGGTGGGAATATTGAAGTTCTTGGCTTTAATGCTCGTCAGCGAAAAGCCTTTCTTAATGCGATTATGCGATATGGGATGCCACCTCAGGATGCTTTTACCACCCAGTGGCTTGTGAGAGATCTGCGAGGCAAGTCAGAGAAAGAGTTCAAGGCTTACGTCTCTCTTTTTATGCGGCATTTATGTGAGCCGGGAGCAGACGGGGCCGAGACCTTTGCTGATGGTGTACCCCGAGAAGGCCTGTCTCGCCAGCATGTCCTTACTAGGATTGGTGTCATGTCCTTGATTCGCAAGAAGGTTCAGGAGTTTGAACATGTTAATGGGCGCTGGAGCATGCCCGAACTTGCGGAAGTAGAGGAAAACAAGAAAATGTCACAGCCAGGGTCACCTTCCCCAAAGACTCCCACACCCTCCACTCCAGGGGACACACAACCCAATACTCCTGCACCTGCCCCACCTGCTGAGGATGGGATAAAAATAGAGGAAAATAGCCTCAAAGAAGAAGAGAGTGCAGAAGGAGAAAAGGAAGTGAAATCTGCAGCCCCTGAAGCCGCTGTTGAGTGTACACAGCCCCCTGCCCCTGCCTCAGAGGATGAAAAGGTCCTTGTTGAGCCTCCCGAGGGAGAGGAGAAAGTGGAAAAGGCAGAGGTCAAGGAGAGAACAGAGGAGCCAATGGAGACAGATCCCAAAGGTATTGCTGATGTGGAGAAGGTGGAGGAGAAGTCAGCAGTCGATCTGACTCCCATTGTGGTGGAGGACAAAGAGGAGAAGAAAGAAGAAGAAGAGAAAAAAGAGGTGATGCTTCAGAATGGAGAGACCCCCAAGGACTTGAATGATGAGAAGCAGAAGAAAAATATTAAACAGCGTTTCATGTTCAACATCGCAGATGGCGGTTTTACTGAGTTGCACTCCCTTTGGCAGAATGAGGAGCGGGCAGCCACAGTCACCAAGAAGACTTACGAGATCTGGCACCGACGGCATGACTACTGGCTGCTGGCTGGCATCATAAACCATGGCTATGCCCGGTGGCAGGACATCCAGAATGACCCACGCTATGCTATCCTCAATGAGCCTTTCAAGGGTGAAATGAACCGTGGCAATTTCTTAGAGATCAAGAATAAGTTTCTAGCCCGAAGGTTCAAGCTCTTAGAACAAGCCCTGGTGATTGAGGAGCAACTGCGTCGGGCGGCTTACCTGAACATGTCAGAGGACCCCTCTCACCCTTCCATGGCCCTGAACACCCGCTTTGCTGAGGTGGAGTGTTTGGCAGAGAGTCATCAGCACCTGTCCAAGGAGTCGATGGCGGGAAACAAGCCAGCAAATGCAGTCCTGCACAAAGTTCTGAAACAGCTAGAAGAACTGCTGAGTGACATGAAAGCCGATGTGACTCGACTCCCAGCTACTATTGCCCGAATTCCCCCAGTTGCTGTGAGGCTACAGATGTCAGAGCGTAATATTCTCAGTCGCCTGGCAAACCGGGCACCTGAACCACCTCCACAGCAGGTAGCCCAGCAGCAGTGA

Related Sequences

bmy_11497T0 Protein

Length: 1941 aa      View alignments
>bmy_11497T0
MASGLGSPSPCSAGSEEEDMDALLNNSLPPPHPENEEDPEEDLSEAETPKLKKKKKPKKPRDPKIPKSKRQKKERMLLCRQLGDSSGEGPEFVEEDEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDDEDDDSKEPKSSAQLLEDWGMEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMVTATEVAPPPPPVEVPIRKAKTKEGKGPNARRKPKGSPRVPDAKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRGVCGRPRPPPMGRSTRAVGPAHLPSLPPDWQDDQSDNQSDYSVASEEGDEDFDERSEAPRRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGRWSMPELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAEDGIKIEENSLKEEESAEGEKEVKSAAPEAAVECTQPPAPASEDEKVLVEPPEGEEKVEKAEVKERTEEPMETDPKGIADVEKVEEKSAVDLTPIVVEDKEEKKEEEEKKEVMLQNGETPKDLNDEKQKKNIKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEPPPQQVAQQQ*