Sequence detailsbmy_11498 (Coding sequence)

Part of scaffold_625 (SequenceType object (1))

For more information consult the page for scaffold_625 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NOP2ENSTTRG00000016100 (Bottlenosed dolphin)

Gene Details

NOP2 nucleolar protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015260, Bottlenosed dolphin)

Protein Percentage 84.07%
cDNA percentage 86.54%
Ka/Ks Ratio 0.4073 (Ka = 0.0552, Ks = 0.1355)

BT.53770ENSBTAG00000014733 (Cow)

Gene Details

putative ribosomal RNA methyltransferase NOP2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019607, Cow)

Protein Percentage 88.66%
cDNA percentage 90.12%
Ka/Ks Ratio 0.20111 (Ka = 0.057, Ks = 0.2836)

NOP2 (Minke Whale)

Gene Details

NOP2 nucleolar protein

External Links

Gene match (Identifier: BACU003082, Minke Whale)

Protein Percentage 96.46%
cDNA percentage 98.2%
Ka/Ks Ratio 0.78582 (Ka = 0.0172, Ks = 0.0218)

Additional orthologs identified in other species via the OPTIC pipeline.

NOP2 (Human)   Nop2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2829 bp    Location:655233..664153   Strand:+
Raw sequence 
>bmy_11498
ATGCGTGAGACGTTTCCGTGGTGCGGCGTTGGAGCGCCTGACCTGGGCCGCACGTGGAGCCCCGCGCCTGCTTCCGAACCCCTTCTCGGAGCTGGATTGGCTTCCAGTACCATGGGGCGTAAATTGGACCCTACGAAGAAGGAGAAGCGCGGGCCGGGCCGAAAGGCCCGGAAACAGAAAGGCGCCGAGACCGAACTTGCCAAATTCTTGCCTGCAGGTGGTGATGAAAATTTAAAGAGGCTGTCCAGTCGTGCCCGAAAGAGGGCAGCCAGGAGGAGGTTGGGCTCTGCTGAAGCCCCTGAGATGAATAAGTCCTCTGGGGCCAAACCATTGCCTGGAAAGCTATCAAAAGGAGCTGTCCAGGCACCCAGTAAGAAGGGAGCCCCGTCCTTATTTAACAGTGCTCGAGGCAAGAAGCGCCCAGCACCAACCCATAGCAGTGACGAGGAAGAAGAGGAGGAAGACTCTGAAGAGGATGGTGTGGTGAACCAAAGGGACCTCTGGGGCTCCGAGGACAGTGATGCTGATATGGTAGATGACTATGGAGCTGACTCCAACTCAGAGGACGAAGATGAGGATGACGGTGAAGAGTTGCTGCCCATTGAAAGGGCTGCTCGGAAGCAGAAGGCCCAGGAGGCTGTTGCTGGGGGCCAGTGGAGTGAGGAGGAGACCTATGAAGAGGAGGAAGAGGAGAAAGTGTCCCCTGAGTCAGGCCCCAAAGAGGATGATGAGATGGAAGGGGACCTGCGGATCAATGTGGACGAGGAGGAGACTTTTGTGCTGCCCCCTGCTGGGGAGATGGAGCAGGATATCCTTCTGGTGCAAGGGGAGCTGGAGGGGGATGCTTGGGAGAAGGCATTTCCAGGCCCCAGGAAATCAGGAAGCAGTTCCTTAACAGGTCCACGTGCCCAGGTTCCAGACTTGCAACGAGTTCACAAGCGCATCCAAGATATAGTGGGAGTGCTGCGCGATTTTGGGACTCAGCGGGAGGAAGGTCGGTCTCGTTCTGAATATCTGCAGCGGCTTCGGAAGGATCTGGCCACTTACTACTCCTACGGAGACTTCCTCCTTGGCAAGCTCATGGACCTCTTCCCTCTGTCTGAGCTGGTGGAGTTTTTGGAAGCCAATGAGGTGCCTCGGCCCATCACCCTCAGGACCAATACCTTGAAGACCCGGCGCCGGGACCTCGCTCAGGCGCTGATCAATCGTGGGGTTAACCTGGATCCCCTGGGCAAGTGGTCGAAGACTGGACTCGTGGTATATGATTCTACGGTGCCCATTGGTGCCACTCCCGAGTACCTGGCTGGGCACTACATGCTGCAGGGGGCCTCCAGCATGTTGCCCGTCATGGCCTTGGCACCCCAGGAACATGAGCGGATCCTGGACATGTGTTGTGCCCCTGGAGGAAAGACCAGCTACATAGCCCAGCTCATGAAGAACACAGGTGTGATCCTCGCCAATGATGCCAACGCCGAGCGGCTCAGGAGCGTCGTGGGCAACCTGCACCGGCTGGGAGTCACCAACACCGTCATCAGCCACTATGACGGGCGCCAGTTTCCCAAGGTGGCGGGGGGCTTTGACCGGGTCCTGCTGGATGCTCCCTGCAGCGGCACTGGGATCATCTCCAAGGACCCAGCGGTGAAGACTAACAAGGTGCAGGGGTTGGGGGACCAGCTGAAAAGTCTCGGGGGAAGGGGGGCTGGCGAAGCGGAGTGGGAGGTGGGCAGCCAGCAGCTCACGTCTCCGGAAGCCACCTTGAGAAGTTCCCACGCTGTGGGTCTCTTCATGTTGGGACAGGATGAGAAGGACATCCTGCGCTGTGCTCGCCTTCAGAAGGAGCTGCTCCTGAGTGCTATTGACTCTGTCAGCGCCGCCTCCCAGACGGGGGGCTGCCTCGTCTACTGCACCTGCTCTGTCATGGTGGAAGAGAACGAGTGGGTGGTAGACTACGCCCTGAGAAAAAGGAACGTGCGGCTGGTGCCCACGGGCCTGGACTTTGGCCAGGAGGGCTTCACCCGCTTCCGGGAAAGGCGCTTCCACCCCACCCTGCGCTCCACCCGCCGCTTCTACCCTCACACCCACAACGTGGACGGTTTCTTTATTGCCAAGTTCAAGAAATTCTCCAATTCTATCCCCCAGTCGCAAACAGGAAATTCTGTGATATCCACCCTTACAAACCTAGACTTGCCCAACCTGAAAGGGCAGGTGACCCCCCAGCCTGAGAGCAGCAGCCTGCCTGCCAAGAAGGCCAGAGTGGCTGGTCAAGCAAAGCAGCGGCTGCAGAAACGGCAACATCCCAAGAAGGCTTCCTTCCAGAAGCAGAATGGCATCTCCAAAGGGACGGGCTCAGAATTGTCCACTGTGTTTTCTGTTACAAAGGCCCAAGCTTCCTCCAAGCTCCAGGATAGCAGTCAGCCAGCTGAAAAAGCAGCAGTGGTCAGGGAACCAAAGGTGGCTGGGAAACTAAAGCAACAGTCACCCAAACTGCAGTCCTCCAAGAAAGCTGCCTTCCGGAAGCAGCGCGCTGCTCCCAAGGGCACCTACGCAGAAACACCTGCTGCGCCGTCCCTCTCCAAGGCCCAGGCCACTCTCAAGCCCGAGGACCGTGATCAGCCCCTTGGGAACACCACCGGGGCTGAGGAGGTTAAGCAGCAGGTGCCAGAGCAGCCTTTCAAGAAAGCTGCCTTCCAGAAACAGAATGGCACCCGCAAGGGACCTAAGACTCCAATCATGTCCCCCCGCAGTTACAGCCGGCCCCCACCAGCAAAGAGGAGAAAATCTCTGTCCGGAGGCGGCAGCCAGCCCCTGCTGTCTTCGATGGATGGTTGA

Related Sequences

bmy_11498T0 SequenceType object (3)

Length: 943 aa      View alignments
>bmy_11498T0
MRETFPWCGVGAPDLGRTWSPAPASEPLLGAGLASSTMGRKLDPTKKEKRGPGRKARKQKGAETELAKFLPAGGDENLKRLSSRARKRAARRRLGSAEAPEMNKSSGAKPLPGKLSKGAVQAPSKKGAPSLFNSARGKKRPAPTHSSDEEEEEEDSEEDGVVNQRDLWGSEDSDADMVDDYGADSNSEDEDEDDGEELLPIERAARKQKAQEAVAGGQWSEEETYEEEEEEKVSPESGPKEDDEMEGDLRINVDEEETFVLPPAGEMEQDILLVQGELEGDAWEKAFPGPRKSGSSSLTGPRAQVPDLQRVHKRIQDIVGVLRDFGTQREEGRSRSEYLQRLRKDLATYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPITLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSTVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANAERLRSVVGNLHRLGVTNTVISHYDGRQFPKVAGGFDRVLLDAPCSGTGIISKDPAVKTNKVQGLGDQLKSLGGRGAGEAEWEVGSQQLTSPEATLRSSHAVGLFMLGQDEKDILRCARLQKELLLSAIDSVSAASQTGGCLVYCTCSVMVEENEWVVDYALRKRNVRLVPTGLDFGQEGFTRFRERRFHPTLRSTRRFYPHTHNVDGFFIAKFKKFSNSIPQSQTGNSVISTLTNLDLPNLKGQVTPQPESSSLPAKKARVAGQAKQRLQKRQHPKKASFQKQNGISKGTGSELSTVFSVTKAQASSKLQDSSQPAEKAAVVREPKVAGKLKQQSPKLQSSKKAAFRKQRAAPKGTYAETPAAPSLSKAQATLKPEDRDQPLGNTTGAEEVKQQVPEQPFKKAAFQKQNGTRKGPKTPIMSPRSYSRPPPAKRRKSLSGGGSQPLLSSMDG*