Sequence detailsbmy_11503 (Coding sequence)

Part of scaffold_625 (SequenceType object (1))

For more information consult the page for scaffold_625 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VAMP1ENSTTRG00000014469 (Bottlenosed dolphin)

Gene Details

vesicle-associated membrane protein 1 (synaptobrevin 1)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013718, Bottlenosed dolphin)

Protein Percentage 94.02%
cDNA percentage 96.58%
Ka/Ks Ratio 0.89999 (Ka = 0.0346, Ks = 0.0385)

BT.35951ENSBTAG00000014603 (Cow)

Gene Details

Vesicle-associated membrane protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019599, Cow)

Protein Percentage 96.55%
cDNA percentage 95.4%
Ka/Ks Ratio 0.196 (Ka = 0.0239, Ks = 0.1222)

Additional orthologs identified in other species via the OPTIC pipeline.

VAMP1 (Human)   Vamp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 357 bp    Location:731563..735393   Strand:+
Raw sequence 
>bmy_11503
ATGAGGTCTGCGCCAGCTCAGCCACCCACCGAAGGGGCAGAAGGGGCTGCCCCAGGTGGGGGTCCCCCTGGCCCTCCTCCTAATATGACCAGTAACAGACGACTACAGCAGACCCAGGCACAAGTGGAGGAGGTGGTGGACATCATGCGTGTAAATGTGGACAAGGTCCTGGAGAGGGACCAGAAGCTGTCAGAGCTGGATGACAGAGCCGACGCTTTGCAGGCGGGCGCATCACAATTTGAGAGCAGCGCTGCCAAGCTAAAGAGGAAGTATTGGTGGAAAAACTGCAAGATGATGATCATGCTGGGAGCCATCTGTGCCATCATCGTGGTAGTTATTGTAAGTAAGTATCGCTGA

Related Sequences

bmy_11503T0 SequenceType object (3)

Length: 119 aa      View alignments
>bmy_11503T0
MRSAPAQPPTEGAEGAAPGGGPPGPPPNMTSNRRLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMIMLGAICAIIVVVIVSKYR*