Sequence detailsbmy_11504 (Coding sequence)

Part of scaffold_625 (SequenceType object (1))

For more information consult the page for scaffold_625 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TAPBPLENSTTRG00000014468 (Bottlenosed dolphin)

Gene Details

TAP binding protein-like

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013717, Bottlenosed dolphin)

Protein Percentage 91.49%
cDNA percentage 94.48%
Ka/Ks Ratio 0.48948 (Ka = 0.0469, Ks = 0.0959)

BT.98677ENSBTAG00000014728 (Cow)

Gene Details

tapasin-related protein precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019601, Cow)

Protein Percentage 82.05%
cDNA percentage 88.56%
Ka/Ks Ratio 0.3701 (Ka = 0.0931, Ks = 0.2515)

Additional orthologs identified in other species via the OPTIC pipeline.

TAPBPL (Human)   Tapbpl (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1323 bp    Location:744477..737150   Strand:-
Raw sequence 
>bmy_11504
ATGGGCTCCGAGGGGTGGTGCTTGCTGGTCTGCTTGGCTCTCTCCGGGGCAGCAGACGCCGTAGAAAGGCAGTGGCGGCCAGTGGACGTGATCTTGGACTGCTTCCTGATGGGGGAAGGTGGGCACCGTGGAGGTTTCGCCAGCAGTGAGAACATGGTGAAGGCCTTGTTGGTGCTGAAGCAGATGCCAGTGCCGGACGACGGCTCCCTGGAAGGCCTCACGGATTTCCAAGGGGGCACACTGGCCAAGGACGACCCACTCATTACCTTCGAGGCCTCAGTGAACCTGATACAGATTCCCCAGGCCGAGGCCTTGCTCCATGCTGACTGCAGCGGGAAAGAGGTGACCTGTGAGATCTCCCGCTATTTTCTCCAGGCCAGGCCAAAGGCCACGGTGGAGACGGCAGCCTGGTTCATCACCAACGTGCTAGTGTCTGGAGAGGGACCTAGTATCTCCATGGTGATGAAGACTCTTGGGGATGCTGAGAATGGGGCTGTCTTGCATCCCATGCTGAAACTGCCCCTGAGCCCCCAGGGGACTGTGCGGACTGAAGTGGAGTTCCAGGTGACAACACAGACCCCATCCCTGAATCTCCTGCTGGGGTCCTCAGCCTCCCTGGACTGTGGCTTCTCCGTGGCACCAGGCTTGGGCATCACCAGCGTGGAGTGGCGGCTGCAGCATAAGGGCAGTGGCCAGCTGGTGTACTGCTGGACCACGGGGCGGGGGCAGGCCAAGCGGGAGGGCGCCACCCTGGAGCCTCAGCAGCTGCTCATGGCTGGGGACGCCTCGCTCACCCTACCCAGCCTCACTCTGAAGGATGAGGGGGCCTACATCTGCCAGATCACAACCTCCCTCTACCGAGCTCAACAGATCATCCAGCTCAACGTCCAAGCTGCCCCCAAAGTACTACTGAGCTTGGCGAGCGAAGCCCTGCCACCCACCCTCATCTGCAGCGTCACTGGCTATTACCCTCTGGATGTGACTGTGGCGTGGATCCGGGAGGAGCTGGGTGGAGCCCCGGCCCCAGTCTCTGGCGCCTCCTTCTCCAGCCTCCGGCAGAGCATGGCAGGCACCTACAGCATCTCCTCCTCCCTGACGGCAGAGCCTGGCTCTGTGGGTGCCACTTACACCTGCCAAGTCACCCACGTCTCCCTGGAGGAGCCCCTGGGGGCCAACACCTGGGTTGCCCCACCAGAGCAGAGGACGGCCTTTGGAGTCCTTTTTGCCAGCAGCCTCTTCGTCCTGGCACTGCTGTTCCTGGGACTGCAGAGACGCCAAGCTACCTCACCAAGGCCTGCCAGGACCCCGAGGCACTCCGGGTAG

Related Sequences

bmy_11504T0 SequenceType object (3)

Length: 441 aa      View alignments
>bmy_11504T0
MGSEGWCLLVCLALSGAADAVERQWRPVDVILDCFLMGEGGHRGGFASSENMVKALLVLKQMPVPDDGSLEGLTDFQGGTLAKDDPLITFEASVNLIQIPQAEALLHADCSGKEVTCEISRYFLQARPKATVETAAWFITNVLVSGEGPSISMVMKTLGDAENGAVLHPMLKLPLSPQGTVRTEVEFQVTTQTPSLNLLLGSSASLDCGFSVAPGLGITSVEWRLQHKGSGQLVYCWTTGRGQAKREGATLEPQQLLMAGDASLTLPSLTLKDEGAYICQITTSLYRAQQIIQLNVQAAPKVLLSLASEALPPTLICSVTGYYPLDVTVAWIREELGGAPAPVSGASFSSLRQSMAGTYSISSSLTAEPGSVGATYTCQVTHVSLEEPLGANTWVAPPEQRTAFGVLFASSLFVLALLFLGLQRRQATSPRPARTPRHSG*