Part of scaffold_625 (Scaffold)

For more information consult the page for scaffold_625 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CD27 ENSTTRG00000014467 (Bottlenosed dolphin)

Gene Details

CD27 molecule

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013716, Bottlenosed dolphin)

Protein Percentage 94.02%
cDNA percentage 96.15%
Ka/Ks Ratio 0.46126 (Ka = 0.0297, Ks = 0.0645)

CD27 ENSBTAG00000014725 (Cow)

Gene Details

CD27 antigen precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019595, Cow)

Protein Percentage 85.54%
cDNA percentage 89.16%
Ka/Ks Ratio 0.37485 (Ka = 0.0839, Ks = 0.2237)

CD27  (Minke Whale)

Gene Details

CD27 molecule

External Links

Gene match (Identifier: BACU018229, Minke Whale)

Protein Percentage 97.6%
cDNA percentage 98.0%
Ka/Ks Ratio 0.27262 (Ka = 0.0116, Ks = 0.0425)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 792 bp    Location:749195..745117   Strand:-
>bmy_11505
ATGGCCCGGCCACCTCCCTGCTGGCTGTGGGTTCTGGGGACCCTGGCAGGGCTCTCAGTGACCCCAGCCTCCAAGAGCTGTCCGGAAAAGCATTACCTGGCTCAAGGAGAACGGTGCTGCCAGATGTGTGAGCCAGGAACGTTCCTGGTGAAAGAGTGTGACCAGCATGAAAAGGCTACTCAGTGTGATCCGTGTACACCGGGGGTCTCCTTCTCGCCAGACCACCACACCCGGCCCCACTGTGAGAGCTGCCGGCACTGTACCTCTGGTCTTCTCATTCGAAACTGCTCCCTCACTGCCAACTCGGAGTGTGCCTGCCCCGAGGGCTGGCAGTGCAGGGACAAGGAGTGTACAGAGTGTGTTGGTCCAGCCCAGGCCCCAGACCCGCACCCACAACCCTCCCACTCACCTTATGCTGAAGGTAAGTTCTACGCAACCCTTCGTCTGGTCATCGGGGAGATACCAGAGGCCAGGACAGGCCGGCATATTCGGACTCTGGCTGATTCCAGGTGGCTGCCTGCCCCAACTCTCTCTACCCACTGGTCACCCCAAAGGTCCCTGTGCAGCGCGGATTGCATCCGCATCTTCGTGCTCCTCTCTGGAATGTTTCTTGCTTTCACCATAGTCGGAGCCCTGTTCCTTCATCAACAAAGAAAATATAGATTAAACACGAGAGAAAGTCCAGTGGCGCCTGCAGAGCCTTGTCCTTACAGCTGCCCCAGGGAGGAAGAGGGCAGTGCCATCCCCATTCAGGAGGATTACCGAAAACCAGAGCCCGCTTCCTACCCCTGA

Related Sequences

bmy_11505T0 Protein

Length: 264 aa      View alignments
>bmy_11505T0
MARPPPCWLWVLGTLAGLSVTPASKSCPEKHYLAQGERCCQMCEPGTFLVKECDQHEKATQCDPCTPGVSFSPDHHTRPHCESCRHCTSGLLIRNCSLTANSECACPEGWQCRDKECTECVGPAQAPDPHPQPSHSPYAEGKFYATLRLVIGEIPEARTGRHIRTLADSRWLPAPTLSTHWSPQRSLCSADCIRIFVLLSGMFLAFTIVGALFLHQQRKYRLNTRESPVAPAEPCPYSCPREEEGSAIPIQEDYRKPEPASYP*