Part of scaffold_625 (Scaffold)

For more information consult the page for scaffold_625 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCNN1A ENSTTRG00000014465 (Bottlenosed dolphin)

Gene Details

sodium channel, non-voltage-gated 1 alpha subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013714, Bottlenosed dolphin)

Protein Percentage 90.53%
cDNA percentage 94.6%
Ka/Ks Ratio 0.36047 (Ka = 0.0437, Ks = 0.1213)

SCNN1A ENSBTAG00000002631 (Cow)

Gene Details

amiloride-sensitive sodium channel subunit alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003413, Cow)

Protein Percentage 80.04%
cDNA percentage 84.1%
Ka/Ks Ratio 0.25255 (Ka = 0.125, Ks = 0.4948)

SCNN1A  (Minke Whale)

Gene Details

sodium channel, non-voltage-gated 1 alpha subunit

External Links

Gene match (Identifier: BACU020212, Minke Whale)

Protein Percentage 98.41%
cDNA percentage 99.17%
Ka/Ks Ratio 0.38996 (Ka = 0.0066, Ks = 0.0169)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1428 bp    Location:824482..836877   Strand:+
>bmy_11507
TACACGGAAATTAAAGAGGAGCTGGAGGAGCTGGACCGCATCACAGAGCAGACGCTCTTCGACCTGTACAAGTACAACTCCTCCAACACCCTCGTGGCCCACGCCCGCGGCCGCCGCGACCTGCGGGAGTCCCTGCCGCACCCCCTGCAGCGCGTGCCGGTCCCGGCTCCGCCCCACGCCGCCAGCAGAGTCCGCCGATCCGGCTCCAGCCTGAGGGATAATAACCCGCAGGTGAACAGGAAGGACTGGAAGATCGGCTTCCAACTGTGCAACCAGAACAAATCGGACTGCTTCTACCAGACGTACTCATCAGGGGTGGATGCAGTGAGGGAGTGGTACCGCTTCCACTACATCAACATTCTGTCCAGACGGCAGGACACCTCTCCATCGCTGGAGGAGGACGCGCTGGGCAAATTCATCTTCGCCTGCCGCTTCAACCAGGCCTCCTGCAATGAGGCGAATTACTCCCACTTCCACCACCCGATGTACGGGAACTGCTACACTTTCAATGACAAGAACAGCTCCAACCTCTGGATGTCCTCCATTTCTGGGGTCAACAACGGTCTGTCCCTGACGCTGCGTACAGAGCAGAATGACTTCATCCCGCTGCTGTCCACGGTGACCGGGGCCAGGGTGATGGTACACGGGCAGGATGAGCCTGCCTTTATGGATGATGGAGGCTTTAACCTGCGGCCTGGTATGGAGACCTCCATCAGCATGACCGTGGAAAGACTTGGGGGTAACTATGGCGACTGCACCAAGAATGGCAGCGATGTCCCAGTGGAGAACCTTTACGGTACCAAGTACACGCAGCAGGTGTGTATCCATTCCTGCTTCCAGGTGAACATGATCAGGGAGTGTGGCTGTGCCTACATCTTCTACCCGCCGCACAGGGGTGTGGAGTTCTGTGACTACAGGAAGCATAATTCCTGGGGCTACTGCTACTATAAGCTCCAGGACGCCTTCTCCTCAGACCGCCTGGGCTGTTTCACCAAGTGCCGGAAGCCATGCAGTGTGACCACCTACAAGCTCTCTGCCGGTTACTCACGATGGCCCTCGGTGACATCCCAGGACTGGGTCTTCAAGATGCTGTCCCGACAGAACAATTACACCATCAAGAACAAGAGAGATGGGGTTGCCAAACTCAACATCTTCTTCAAGGAGCTGAACTACAAAACCAACTCTGAGTCTCCCTCTGTCACGGTGCGCCGAGGGCGCAGGGGTGCCCAGGAGGTGGCCTCCACTCCAGCCTCCTCCCTCCCCTCCCGTTTCTGCCCCCACCCCGCCTCCCCATCCTCATCCCCTCTGGGCCCTGCCACCTCCCTGGCCTTGTCAGCCCCTCCGCCTGCCTATGCCACCCTGGGCCCCCGCCTGGCTCCATCAGGCTCCACGGAGGCCAGCTCCTCTGCCCACGCTCCGGGGGAGCCC

Related Sequences

bmy_11507T0 Protein

Length: 476 aa      View alignments
>bmy_11507T0
YTEIKEELEELDRITEQTLFDLYKYNSSNTLVAHARGRRDLRESLPHPLQRVPVPAPPHAASRVRRSGSSLRDNNPQVNRKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRRQDTSPSLEEDALGKFIFACRFNQASCNEANYSHFHHPMYGNCYTFNDKNSSNLWMSSISGVNNGLSLTLRTEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGMETSISMTVERLGGNYGDCTKNGSDVPVENLYGTKYTQQVCIHSCFQVNMIRECGCAYIFYPPHRGVEFCDYRKHNSWGYCYYKLQDAFSSDRLGCFTKCRKPCSVTTYKLSAGYSRWPSVTSQDWVFKMLSRQNNYTIKNKRDGVAKLNIFFKELNYKTNSESPSVTVRRGRRGAQEVASTPASSLPSRFCPHPASPSSSPLGPATSLALSAPPPAYATLGPRLAPSGSTEASSSAHAPGEP