Part of scaffold_625 (Scaffold)

For more information consult the page for scaffold_625 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNFRSF1A ENSTTRG00000014464 (Bottlenosed dolphin)

Gene Details

tumor necrosis factor receptor superfamily, member 1A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013713, Bottlenosed dolphin)

Protein Percentage 65.53%
cDNA percentage 66.59%
Ka/Ks Ratio 0.37231 (Ka = 0.0241, Ks = 0.0647)

TNFRSF1A ENSBTAG00000004211 (Cow)

Gene Details

tumor necrosis factor receptor superfamily member 1A precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005522, Cow)

Protein Percentage 81.36%
cDNA percentage 85.76%
Ka/Ks Ratio 0.26253 (Ka = 0.1043, Ks = 0.3972)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1746 bp    Location:842291..854233   Strand:+
>bmy_11508
CCCACTCTCCCTTCCCCTCCCACCTCCTCTCTGCTTGACTTTTCTCGGAGTTCTCCGAACTCAGGCTGCAGTGCCGGCCTTCCGGGTTTGAGGTCCCCGGGACCCGGCTGTGATCCCCGCCCCAGTCTCAACCCTCCACTCCCCTGCCCGACGCCCGGGCTCCACTCCGGACCCTGCTCATCCTGGGACTGTGTCGCTGCCACTGTCGCCTCTGTCCACCACTGCCTGAGCCCTGATGGGGGAGTGAGAGGCCACAGCTGGCCGGACATGGGCCTCCCCACCGTGCCTGGCCTGCTGCTGCCACTGGTGCTCCGGGCTCTGTTGGTGGACGTGTACCCCGCGGGGATTCATGGGCTGGTCCCTCACCCTGGGGACCGTGAGAAGAGAGAGAGTTCGTGTCCCCAAGGGAAATATAGCCACCCTCAAAATAATTCCATTTGCTGTACAAAGTGCCACAAAGGCACCTACCTGTACAATGATTGTCCGGGCCCGGGGCTGGACACGGACTGCAGGGTGTGTGCCCGCGGCACCTTTACTGCTTCGGAGAACCACCTCAGACAATGCCTGAGCTGCTCCAAGTGCCGGAAAGAAATGTTCCAGGTGGAGATTGCTCCTTGCGCAGTGGACCGGGATACCGTGTGTGGCTGCAGGAAGAACCAGTATCGGAAGTATTGGAGTGAAACTCTGTTCCAGTGTCTGAACTGCAGCCTCTGCCCCAACGGCACGGTGCACCACTCCTGTGAGCATGGCCCTCCCGACCCCCCTGGTCACCCCGTCTCCGGAGGGCGGTCTCCAGCTTGCTGTACTCCTGCCCCTCCTAGTTCTCCCTCCGGCCCTCGGGGTGCTGGGCCATCCTCCTTCAGCTGTGCCGCATCTCTCCCTACAGGCAAGGAGAGACAGGACACCATCTGCCACTGCCACGTGGGGTTCTTTCTAAGAGATGCTGAGTGCGTCTCCTGTGATCACTGTAAGAACACGGAGTGCGAGAAATTATGTCCAGCTCTACCTGTAACTAGTAACGACTCTCAGGACCCAGGCACCACAGTACTGTTGCCCCTGGTGATCATCTTTGGTCTTTGCCTGGCATCCTTCCTCCTCATTGTTTTAGCATGCCGCTACCAGCGTTGGAAGCCCAAGCTCTACTCCATCATTTGTGGGCAGTCGGCTCCTGTAAAGGAGGGGGAGCCAGAGCCCCTGGCCCCGGCCCCAAGCTTCAGTCCCATCCCGAGCTTCAGTCCTGCCTCCAGTCCCACCTTCACCCCCTGTGACCGGTCCAACTTCAGAGTCACATCACTCCCCAGAGAGATGGCCCCGCCCCACCAAGGGGCTGGCCCCATCCTCCCTGCGCCTCCAGCCTCCGCCCCCGTCCCCACCCCTGTGCAGAAGTGGGAGGCCAGCGCCCACGGCGCCCCCAGCGCCCCCGCTCCGCTCGCAGATGCCGACCCCGCGACACTGTACGCCGTGGTGGACGGCGTGCCCCCGTTGCGCTGGAAGGAGTTCGTGCGGCGGCTGGGGCTGAGTGATCACGAAATCGAGCGGCTGGAGCTGCAGAACTTGCGCTGCCTGCGCGAGGCGCAGTACAGCATGCTGGCGGCCTGGCGGCGGCGCACCCCGCGGCGCGAGGCCACGCTGGAGCTGCTGGGCCGCGTGCTCCGCGACATGGACCTGCTCGGCTGCCTGGAGGACATCGAGGAAGCGCTGGGCGGCCCCGCCCCCCTCGCGCCCGAGCCCCGCCTTCCCCGATGA

Related Sequences

bmy_11508T0 Protein

Length: 582 aa      View alignments
>bmy_11508T0
PTLPSPPTSSLLDFSRSSPNSGCSAGLPGLRSPGPGCDPRPSLNPPLPCPTPGLHSGPCSSWDCVAATVASVHHCLSPDGGVRGHSWPDMGLPTVPGLLLPLVLRALLVDVYPAGIHGLVPHPGDREKRESSCPQGKYSHPQNNSICCTKCHKGTYLYNDCPGPGLDTDCRVCARGTFTASENHLRQCLSCSKCRKEMFQVEIAPCAVDRDTVCGCRKNQYRKYWSETLFQCLNCSLCPNGTVHHSCEHGPPDPPGHPVSGGRSPACCTPAPPSSPSGPRGAGPSSFSCAASLPTGKERQDTICHCHVGFFLRDAECVSCDHCKNTECEKLCPALPVTSNDSQDPGTTVLLPLVIIFGLCLASFLLIVLACRYQRWKPKLYSIICGQSAPVKEGEPEPLAPAPSFSPIPSFSPASSPTFTPCDRSNFRVTSLPREMAPPHQGAGPILPAPPASAPVPTPVQKWEASAHGAPSAPAPLADADPATLYAVVDGVPPLRWKEFVRRLGLSDHEIERLELQNLRCLREAQYSMLAAWRRRTPRREATLELLGRVLRDMDLLGCLEDIEEALGGPAPLAPEPRLPR*