Sequence details bmy_11540 (Coding sequence)

Part of scaffold_626 (Scaffold)

For more information consult the page for scaffold_626 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IQCF1 ENSTTRG00000001439 (Bottlenosed dolphin)

Gene Details

IQ motif containing F1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001356, Bottlenosed dolphin)

Protein Percentage 91.67%
cDNA percentage 96.03%
Ka/Ks Ratio 1.03069 (Ka = 0.0432, Ks = 0.0419)

IQCF1 ENSBTAG00000000805 (Cow)

Gene Details

IQ domain-containing protein F1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001065, Cow)

Protein Percentage 78.11%
cDNA percentage 88.76%
Ka/Ks Ratio 0.75635 (Ka = 0.1178, Ks = 0.1558)

Additional orthologs identified in other species via the OPTIC pipeline.

IQCF1 (Human)   Iqcf1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 510 bp    Location:24665..23428   Strand:-
Raw sequence 
>bmy_11540
GCTAAACAAGAGAATATAGCTGCAACAAAGGGAGTAGATGATGCTAATAAGAGACCCAGAGCAATCCCAAGAACCCCAAATAGGCCTCCCATCAGTAATCCAGAAGTAGTAAAGATCCAGGCCTGGTGGCGGGGCACCCTGGTGCGTAGCACACTGCTGTACGTGGCTCTCAGGGTGTGGATCATTCAGGGCTGGTGGAGGCATAAGCTGGTGAAGCTGCATGAGAATAGGCGGCGGACAGCTCTGGAGAACTTTACACAGAAGGAGTGGGCGGCAGTCAGGCTGCAGTCCTGGGTCCGCATGTGGCGCATCCGTTGGCGCTACTGCCGTTTGCTCAACGCTGCCCGCATCATCCAGGCCTACTGGAGATGCCAATCCTGCGCTTCCCAGGGTTTCACCAAGGGCCACTACAGAGTCACGGCCAACCAGCTGCATCTCGAACTCGAGGTCTTGCTGGGCTCAGGGCCTTGCATTGTGACAGAGTGTATTCCCCTTCCAATAAAGCAGTGA

Related Sequences

bmy_11540T0 Protein

Length: 170 aa      View alignments
>bmy_11540T0
AKQENIAATKGVDDANKRPRAIPRTPNRPPISNPEVVKIQAWWRGTLVRSTLLYVALRVWIIQGWWRHKLVKLHENRRRTALENFTQKEWAAVRLQSWVRMWRIRWRYCRLLNAARIIQAYWRCQSCASQGFTKGHYRVTANQLHLELEVLLGSGPCIVTECIPLPIKQ*