Part of scaffold_626 (Scaffold)

For more information consult the page for scaffold_626 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RRP9 ENSTTRG00000001440 (Bottlenosed dolphin)

Gene Details

ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001357, Bottlenosed dolphin)

Protein Percentage 88.73%
cDNA percentage 89.62%
Ka/Ks Ratio 0.23758 (Ka = 0.0093, Ks = 0.0393)

RRP9 ENSBTAG00000000670 (Cow)

Gene Details

U3 small nucleolar RNA-interacting protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000891, Cow)

Protein Percentage 94.61%
cDNA percentage 93.46%
Ka/Ks Ratio 0.09453 (Ka = 0.0251, Ks = 0.2652)

RRP9  (Minke Whale)

Gene Details

ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)

External Links

Gene match (Identifier: BACU005547, Minke Whale)

Protein Percentage 91.53%
cDNA percentage 92.83%
Ka/Ks Ratio 0.46988 (Ka = 0.0611, Ks = 0.1301)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1356 bp    Location:37516..29570   Strand:-
>bmy_11541
ATGGAGCCGTGGGAGGCGGGGTCCACCGGGCGGTGGGAGCCTATCTTGGCTTGGAGTCTTGTGGGACGGCCCGGGTTCAGCCGCCACGTGAGTTCTCCAGGGGTCGCCGCAACACACACGGTGGGCAGCATGTCGGCGACAGGGGCGGCTCGAAAGAGGGGAAAGCCGGCCTCGGGGGCCGGGGCTGGTGCGGGGGCCGGCAAGCTGCGGCGAAAGGGCGACTCTTCTGGGGACAAGGGCAAGTCCAAGGGTGGCGGCAAGATGAATGAGGAGATCTCCAGCGACTCGGAGAGTGAGAGCCTAGTTCCCAGGAGGACTGAGGAGGAGGAGGAGGAGGAGCTGGAGGAGACCGCACAGGAGAAGAAGCTGCGCTTGGCCAAGCTCTACCTTGAACAGCTTAAGCAGCAAGAGGAGGAGAAGGCCGAGGCCCGCGAATTTGAGGAGGACCAGGTGGCGGGGAGGCTGAAGGAGGACGTGCTCGAGCAGAGAGGCAGGCTGCAGAAGTCGGTGGCAAAGGAGATCCAGGCCCCAGACCCTGCTGACATTCGAATCTTACGGGGTCACCAGCTGTCCATCACATGTTTGGTTATCACCCCTGACGACCTGGCCATCTTTTCTGCCTCCAAAGACTGCACCATTATTAAGTGGAGTGTGGAAAGTGGACGGAAGCTTCATGTGATCCCTCGAGCCAAGAAGGGTGCCGAGGGGCAGCCCTCCGGCCACAGTAGCCACGTCCTCTGCATGGCCATCTCCTCCGATGGCAACTTCGGGCACCAGGATGCTGTGGCTGCACTGGATGCTCTGAGCAGGGAGTGCTGCGTGACCGCCGGGGGCCGGGACGGGACCGTGCGTGTGTGGAAGATCCCCGAGGAGTCCCAGCTTGTCTTCTACGGCCACCAGGGCTCCATTGACAGCATCCAGCTCATCAATGAGGAGCACATGGTGTCGGGTGCAGATGATGGTTCTGTAGCCTTGTGGGGCCTCTCTAAGAAGCGGCCACTTGCCCTGCAGCGTGAGGCCCATGGGCTGCGGGGGGAGCTGGGCTTGGAGCAGCCCTTCTGGGTGTCATCGGTGGCAGCCCTGCTCAACACAGACCTCGTGGCCACAGGCTCTCACAGCAACTCTGTGCGGCTCTGGCAATGCGGGGAGGGCTTCCGGCAGCTTGACCTTCTCTGCGACATCCCCCTGGTGGGCTTTATCAATAGCCTCAAGTTCTCCAGTTCTGGGGACTTCCTGGTGGCTGGGGTAGGGCAGGAGCACAGGCTTGGCCGGTGGTGGCGGATCAAAGAGGCCCGGAACTCCATCTGCATCATCCCTCTCCACAGGGCCCCCAGGCCCCCTGCTGCTGGCTCCTGA

Related Sequences

bmy_11541T0 Protein

Length: 452 aa      View alignments
>bmy_11541T0
MEPWEAGSTGRWEPILAWSLVGRPGFSRHVSSPGVAATHTVGSMSATGAARKRGKPASGAGAGAGAGKLRRKGDSSGDKGKSKGGGKMNEEISSDSESESLVPRRTEEEEEEELEETAQEKKLRLAKLYLEQLKQQEEEKAEAREFEEDQVAGRLKEDVLEQRGRLQKSVAKEIQAPDPADIRILRGHQLSITCLVITPDDLAIFSASKDCTIIKWSVESGRKLHVIPRAKKGAEGQPSGHSSHVLCMAISSDGNFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDSIQLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLRGELGLEQPFWVSSVAALLNTDLVATGSHSNSVRLWQCGEGFRQLDLLCDIPLVGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSICIIPLHRAPRPPAAGS*