Part of scaffold_626 (Scaffold)

For more information consult the page for scaffold_626 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POC1A ENSTTRG00000016798 (Bottlenosed dolphin)

Gene Details

POC1 centriolar protein homolog A (Chlamydomonas)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015926, Bottlenosed dolphin)

Protein Percentage 88.76%
cDNA percentage 90.09%
Ka/Ks Ratio 0.25666 (Ka = 0.0739, Ks = 0.288)

POC1A ENSBTAG00000001471 (Cow)

Gene Details

POC1 centriolar protein homolog A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001927, Cow)

Protein Percentage 88.76%
cDNA percentage 87.55%
Ka/Ks Ratio 0.16807 (Ka = 0.0767, Ks = 0.4563)

POC1A  (Minke Whale)

Gene Details

POC1 centriolar protein A

External Links

Gene match (Identifier: BACU005552, Minke Whale)

Protein Percentage 88.14%
cDNA percentage 90.38%
Ka/Ks Ratio 0.29312 (Ka = 0.0756, Ks = 0.258)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 912 bp    Location:251236..246322   Strand:-
>bmy_11552
TTCACATATTTGACCCTGGCTCTCCCTCAGGAGGACCCCTCGCTGGAGAGGCATTTTAAGGGCCACCGGGATGCAGTTACCTGTGTGGACTTCAGTCTCAACACGAAGCAGCTGGCAGTCACTGGAGGTGTGGCCTGTCCCCATGGGGAAGGCAGAGCTGGGCTGTCCCTGCTGCCCGCACCCCACGCTCCGCCCATCTCCAGCATCCTGGTGGAGGCCCCGGGCCCGCTTGAGCCGAGCGTCATGGCATCCGCTCTCTCCTCAGCCAGTGGCTCCATGGACTCATGCCTCATGGTGTGGCACATGAAGCCCCAGTCACGTGCCTACCGCTTTGCTGGCCACAAGGACACCGTCACCTGTGTGAACTTCTCCCCTTCGGGACACCTGCTTGCCTCGGGCTCCCGCGACAAGACTGTCCGCATCTGGGTACCCAACGTCAAAGGTGAGTCAACCATGTTTCGTGCACACACGGCCACAGTGAGGAGCGTCCATTTCTGCAGCGATGGCCAGTCCTTCGTGACAGCCTCCGACGACAAGACAGTCAAGGTGTGGTCAACTCATCGCCAGAAATTCCTGTTCTCCCTGAGCCAGCACATCAACTGGGTCCGCTGTGCCAAGTTCTCCCCGGATGGGCGGCTCATCGTGTCCGCCAGTGATGACAAGACTGTCAAGCTGTGGGACAAGACCAGCCGGGAGTGTGTCCACTCGTACTGTGAGCACGGCGGCTTTGTCACCTACGTGGACTTCCACCCCAGCGGCACGTGCATCGCCGCCGCCGGCATGGACAACACAGTGAAGGTGTGGGACGTGCGGACTCACCGGCTCTTGCAGCACTATCAGCGTGAGTGTCCCCGAGTGGCCGCAGTGGGACTGTGCCACGCCGGGTGTCTGGCTCTTGGCTGCGGGGCTTAA

Related Sequences

bmy_11552T0 Protein

Length: 304 aa      View alignments
>bmy_11552T0
FTYLTLALPQEDPSLERHFKGHRDAVTCVDFSLNTKQLAVTGGVACPHGEGRAGLSLLPAPHAPPISSILVEAPGPLEPSVMASALSSASGSMDSCLMVWHMKPQSRAYRFAGHKDTVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTMFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQRECPRVAAVGLCHAGCLALGCGA*