Part of scaffold_626 (Scaffold)

For more information consult the page for scaffold_626 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BAP1 ENSTTRG00000001208 (Bottlenosed dolphin)

Gene Details

BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001135, Bottlenosed dolphin)

Protein Percentage 97.67%
cDNA percentage 97.49%
Ka/Ks Ratio 0.09292 (Ka = 0.0031, Ks = 0.033)

BT.20209 ENSBTAG00000045817 (Cow)

Gene Details

ubiquitin carboxyl-terminal hydrolase BAP1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054730, Cow)

Protein Percentage 97.44%
cDNA percentage 95.08%
Ka/Ks Ratio 0.06547 (Ka = 0.0123, Ks = 0.1876)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2190 bp    Location:475342..465577   Strand:-
>bmy_11559
ATGAATAAGGGCTGGCTGGAGCTGGAGAGCGACCCTGGCCTCTTCACCCTCCTGGTGGAAGATTTCGGTGTCAAAGGGGTGCAGGTGGAGGAGATCTATGACCTTCAGAGCAAATGCCAGGGCCCCGTGTATGGATTCATCTTCCTGTTCAAATGGATCGAAGAGCGCCGATCCCGTCGCAAGGTCTCTACCTTGGTGGATGATACATCTGTGATTGATGATGATATTGTGAATAACATGTTCTTTGCCCACCAGCTGATCCCCAACTCTTGTGCCACTCATGCCCTGCTGAGCGTGCTCCTCAACTGCAGCAATGTGGACCTGGGGCCCACCCTGAGTCGCATGAAGGACTTCACCAAAGGCTTCAGCCCTGAGAGCAAAGGATATGCGATTGGCAATGCTCCAGAGTTGGCCAAGGCACATAATAGCCATGCCAGGCCTGAGCCACGCCATCTCCCCGAGAAGCAGAATGGCCTTAGTGCCGTGCGGACCATGGAGGCATTCCACTTTGTCAGCTATGTGCCTATCACAGGCCGGCTTTTTGAGCTGGATGGGCTGAAGGTTTACCCCATTGACCATGGGCCTTGGGGGGAGGATGAGGAGTGGACAGACAAGGCCCGGAGGGTCATCATGGAGCGTATCGGGCTCGCCACTGCAGGGGAGCCCTACCATGACATCCGCTTCAACCTGATGGCGGTGGTGCCCGACCGCAGGATCAAGTATGAGGCCAGGCTGCACGTGCTGAAGGTGAACCGTCAGACAGTACTGGAGGCCCTGCAGCAGCTGATTAGGGTAACGCAGCCAGAGCTGATTCAGACCCACAAGTCTCAAGAGTCACAGTTGCCTGAAGAGACCAAACCAGTCTGCAGCAAGTCCCCTCTGGCCCTGGAAACAAGCAGGGCCCCAGCGGCCTCTGAGGGCACCCACACAGATGGTGCGGAGGAGGTGGCTGGTTCGTGCCCACAAGCCCCGACCCACAGCCCTCCCAGCAAACCCAAGCTGGTGGTGAAGCCTCCAGGGAGCAGCATCAATGGGGTTCCCCCAAACCCCACTCCTATCGTCCAGCGGCTGCCAGCCTTTCTGGACAATCACAACTATGCCAAGTCCCCCATGCAGGAGGAGGAAGACCTGGCAGCAGGTGTGGGCCGCAGCCGAGTTCCAGTCCGCCCACCCCAGCAGTACTCAGACGATGAGGACGACTACGAGGATGACGAGGAGGATGACGTGCAGAACACCAACTCCGCCATCAGGTATAAGCGAAAGGGGCCGGGGAAACCGGGGCCATTGAGTGGCTCTGGGGATGGGCAGCTGTCGGTGCTGCAGCCCAACACCATCAACGTCTTGGCCGAGAAGCTCAAAGAGTCCCAGAAAGACCTCTCAATTCCTCTGTCCATCAAGACGAGCAGCGGGGCCGGGAGTCCGGCTGTGGCAGTGCCCACGCACTCACAGCCCTCGCCCACCCCCAGCAATGAGAGCACTGACACAGCCTCTGAGATCGGCAGCGCTTTCAATTCGCCACTACGCTCGCCTATCCGCTCGGCCAACCCCACGCGGCCCTCTAGCCCCGTCACCTCCCACATCTCCAAGGTGCTTTTTGGAGAGGATGACAGCCTGCTGCGTGTTGACTGCATACGCTACAATCGTGCTGTACGCGACCTGGGTCCTGTCATCAGCACGGGCCTGCTGCACCTGGCTGAGGACGGTGTGCTGAGTCCCCTGGCACTGACAGAGAGTGGGAAGGGTTCCTCACCTTCTATCAGACCGAGCCAAGGCAGCCAGGGGTCTGGTAGCCCAGAGGAGAAAGAGGTGGTGGAGACTGTGGACAGCAGAGAGAAGCCTGGGCTGGTCAGGCCTAGTGAGCCCTTGAGCGGGGAGAAGTACTCACCCAAGGAGCTGCTGGCACTGCTGAAGTGTGTGGAGGCTGAGATTGCAAACTATGAGGCCTGCCTCAAGGAAGAGGTGGAGAAGAGGAAGAAGTTCAAGATCGACGACCAGAGAAGAACCCACAACTATGATGAGTTCATCTGCACCTTCATCTCCATGCTGGCTCAGGAAGGCATGCTGGCCAACCTGGTGGAGCAGAACATCTCGGTGCGGCGGCGCCAGGGGGTCAGCATTGGCCGACTCCACAAGCAGCGGAAGCCTGACCGGCGGAAACGCTCACGCCCCTACAAGGCCAAGCGCCAGTGA

Related Sequences

bmy_11559T0 Protein

Length: 730 aa      View alignments
>bmy_11559T0
MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEETKPVCSKSPLALETSRAPAASEGTHTDGAEEVAGSCPQAPTHSPPSKPKLVVKPPGSSINGVPPNPTPIVQRLPAFLDNHNYAKSPMQEEEDLAAGVGRSRVPVRPPQQYSDDEDDYEDDEEDDVQNTNSAIRYKRKGPGKPGPLSGSGDGQLSVLQPNTINVLAEKLKESQKDLSIPLSIKTSSGAGSPAVAVPTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHISKVLFGEDDSLLRVDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTESGKGSSPSIRPSQGSQGSGSPEEKEVVETVDSREKPGLVRPSEPLSGEKYSPKELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ*