Part of scaffold_626 (Scaffold)

For more information consult the page for scaffold_626 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NISCH ENSTTRG00000008512 (Bottlenosed dolphin)

Gene Details

nischarin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008082, Bottlenosed dolphin)

Protein Percentage 93.02%
cDNA percentage 93.19%
Ka/Ks Ratio 0.22135 (Ka = 0.0225, Ks = 0.1016)

NISCH ENSBTAG00000014779 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019661, Cow)

Protein Percentage 93.58%
cDNA percentage 91.35%
Ka/Ks Ratio 0.0911 (Ka = 0.0344, Ks = 0.3771)

NISCH  (Minke Whale)

Gene Details

nischarin

External Links

Gene match (Identifier: BACU005564, Minke Whale)

Protein Percentage 97.76%
cDNA percentage 97.89%
Ka/Ks Ratio 0.24816 (Ka = 0.0136, Ks = 0.0549)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4413 bp    Location:523842..563848   Strand:+
>bmy_11563
ATGGGCCCTCAGTTTCTCCCACGCTGCAAAGAGCGCGGCAGGCGGTGCCACGCAGAGAGGGGCGGGACCCTAGGACCAGGGGGCCTCATCCAGGTTTACATCATCCAGGTCACTGATGGCAGCCATGAGTGGACAGTCAAGCACCGCTACAGCGATTTCCATGACCTACATGAAAAGCTCGTCGCAGAGAGGAAGATCGATAAAAGTTTGCTTCCGCCCAAAAAGATAATTGGGAAAAACTCCAGGAGCTTGGTGGAAAAGAGGGAGAAGGATCTGGAGGTCTACCTCCAGACACTCCTGGCCACCTTCCCTGACGTGGCCCCCAGAGTGCTGGCCCACTTCTTGCATTTTCACTTCTACGAGATTAATGGCATCACTGCAGCACTGGCTGAGGAGCTCTTTGAAAAAGGAGAACAGCTCCTGGGGGCCGGCGAGGTCTTTGCCATCAGGCCCCTGCAGCTGTACGCGGTCACCGAGCAGCTGCAGCAGGGAAAGCCCACGTGCGCTAGCGGGGATGCCAAGACTGACCTGGGGCACATCCTGGACTTCACCTGTCGCCTTAAGTACCTTAAGGTTTCTGGCACAGAAGGACCTTTTGGGACCAGCAACATTCAGGAGCAGCTCCTGCCTTTTGATCTGTCAATATTCAAGTCTCTTCATCAGGTGGAGATAAGTCACTGTGATGCCAAGCGCATCCGGGGGCTGGTCGCATCCAAGCCCACCTTGGCCACGATGAGTGTCCGCTTCTCAGCAACTTCCATGAAGGAAGTCCTCGTTCCTGAAGCCTCAGAATTTGATGAGTGGGAGCCAGCAGGCGCAGCCCTGGAGGGCACTGTGACTGCCGTCATCCCCACGTGGCAGGCGCTGACCGCTCTGGACTTGAGTCACAACAGCATCTCTGAGATCGATGAGTCTGTGATTGAGTTCCTGGACCTGAGTCACAATGGAGTGCTGGTCGTGGACAATCTGCAGCACCTGTACAACCTCGTGCACCTGGACCTGTCCTACAACAAGCTGTCCTTCTTGGAAGGGGTTCACACCAAACTGGGGAACATCAAGACCCTGAACCTGGCAGGCAATCTCCTGGGGAGTCTGAGTGGCCTGCACAAGCTCTACTCCCTGGTCAACCTGGATCTCAGCGACAACAGAATCGAACAGATGGAGGAGGTCAGGAGCATCGGCAGCCTCCCGTGCCTGGAGCATGTGGCTCTGCTGAACAACCCTCTGAGCATCATCCCTGACTACCGGACCAAGGTGCTGGCTCAGTTCGGAGAGCGGGCCTCGGAGGTCAGTGAGGATTCTAGGCTCTCTGCTGCCCCGTGCGTCAGGCCCAGCAGCTCCCCTCCCACCGTGGCTCCCACCTCTGCCTCCCTGCCCCAGCCCATCCTCTCCAACCAAGGAATCATGTTTGTGCAAGAAGAGGCCCTGGCCAGCAGCCTGTCATCCACCGACAGTCTGACTCCTGAGGACCGGCCCATTGCGCGGGGATGCTCTGATTCCTTGGAGTCCATCCCTGCGGGACAGGCACCTTCTGATGATTTAAGAGACGTGCCGGGAGCTGTTGGCGGTGCAAGCCCAGAGCATGCAGAGCCAGAGGTCCAGGTGGTGCCCGGGTCCGGCCAGATCATCTTCCTGCCCTTCACCTGCATTGGCTACACCGCCACCAACCAGGACTTCATCCAGCGCCTGAGCACGCTCATCCGGCAGGCCATCGAGCGGCAGCTACCTGCTTGGATCGAGGCTGCCAACCAGCGAGAGGAGGGCCAGGGCGAGCAGGGCGAGGATGATGAGGAGGAGGAGGAGGATGTTACTGAGAACCGCTACTTTGAAATGGGGCCCCCGGATGTGGAGGAAGAGGAAGAGGGTGGGCCAGGAGAGGAAGAGGAAGAAGAGGAGGAGGAAGAGGAGGAGGAGGAGGGCGAGGAGGAGCGCCTGGCTCTGGAGTGGGCCCTGGGCGCAGATGAGGACTTCCTGCTGGAGCACATCCGCATCCTCAAGGTGCTCTGGTGCTTCTTGATCCACGTGCAGGGCAGCATCCGCCAGTTCGCTGCCTGCCTCGTGCTCACAGACTTCGGCATCGCCGTCTTTGAGATCCCGCACCAGGAGTCGCGGGGCAGCAGCCAGCACATCCTCTCCTCCCTGCGCTTTGTGTTCTGCTTCCCACACGGCGACCTCACCGAGTTTGGCTTCCTCATGCCGGAGCTGTGCCTGGTGCTCAAGGTGCGGCACAGCGAGAACACGCTCTTCATCATCTCAGACGCCGCCAACCTGCACGAGTTCCACGCTGACCTGCGCTCTTGCTTCGCCCCGCAGCACATGGCCATGCTGTGCAGCCCCGTGCTCTACGGCAGCCACACCAGCCTGCAGGAGTTCCTGCGCCAGCTGCTCACCTTCTACAAGGTGGCGGGCGGCTGCCAGGAGCACAGCCAGGGCTGCTTCCCCGTGTACCTGGTCTACAGTGACAAGCGCATGGTGCAGACGGCCGCCGGGGACTACTCGGGCAACATCGAGTGGGCCAGTTGCACGCTCTGCTCCGCCGTGCGGCGCTCCTGCTGCGCACCCTCCGAGGCTGTCAAGTCTGCTGCCATCCCCTACTGGCTGCTGCTCACACCCCAGCACCTCAACGTCATCAAGGCCGACTTCAACCCCATGCCCAATCGCGGCACCCACAACTGCCGCAACCGCAACAGCTTCAAGCTTAGCCGTGTGCCGCTCTCCACTGTGCTTCTGGACCCCACACGCAGCTGCACTCAGCCGAGGGGCGCCTTCGCGGACGGCCACGTGCTTGAGCTGCTTGTGGGCTACCGCTTTGTCACCGCCATCTTCGTGCTGCCCCATGAGAAGTTCCACTTCCTGCGCATCTACAACCAGCTGCGGGCCTCACTGCAGGACCTGAAGACTGTAGTCATCGCCAAGACCCCTGCAACCGGGGGCAGGCCTCAGAGCCCCCCTGTGGATGGCCAGCCTGCCGAGGACGGGGCCCGCAATGAGCAGCATCTCCAGGAGGTCCCGGCAGAAGCTCCAGCTCCAGCCCCAGCCCCAGCGGAGGTCACAGCTCTAACCCCGCCAAAGACCCCAGCTCCGGCAGAGCCCTCAGTGCCAGCTTTGGTCCCAGCGGAGGCCCCAGCCTCAGCAGAGACCCCTTCGGAGGCCTCAGTGGGGGCCTCGGCCCCGGCAGCGGAGGCTGCAGCACAAGTGGAGGCCCCCGCCCAGTACCCAAGCGACCACTTGATCCGGTCCACGTCGGAGGAGAATCAGATCCCCTCGCACCTGCCCGCCTGCCCGTCGCTCCGGCACATCGCCAGCCTGCGGGGGAGCGCCATCATCGAGTTCTTCCACAGCAGCGTTGCCGAGGTGGAAAACGAGGAGCTGCGGCACCTCCTGTGGTCGTCGGTGGTGTTCTACCAGACCCCGGGGCTAGAGGTGACCGCCTGCGTGCTGCTCTCCACCAAGGCCGTGTACTTTGTGCTGCACGATGGCCTCCGCCGCTACTTCTCGGAGCCGCTGCAGGATTTCTGGCATCAGAAAAACGCCGACTACAACAACAGTCCCTTCCACATCTCTCAGTGCTTTGTTTTAAAACTCAGCGACCTGCAGGTAGTCAACGTTGGACTCTTCGACCAGTATTTCCGGCTGACGGGCTCCTCTCCGGCGCAGGTGGTTACATGCTTGACACGGGACAGCTACCTGACACACTGCTTCCTCCAGCACCTCATGGCCGTGCTCTCCTTGCTGGAACGCACGCCCTCACCTGAGCCTGTCGACAAAGACTTCTACTCCGAGTTTGGAAACAAGACCACAGGGAAGATGGAGAACTATGAGCTGATCCACTCAAGCCGTGTCAAGTTCACCTACCCCAGTGAGGAGGAGGTCGGGGACCTGACATTCACTGTGGCCCAGAAGGTGGCTGACCCAGAGAAGGCGCCGTCCCTCAGCATCCTGCTGTACGTGCAGGCCTTCCAGGTGGGCACACCACTGTCTGGGCGCTGCAGGGGCATGTTGCGCCCCAAAACGCTCCTGCTCACCAGCGCCGAGATCTTCCTCCTGGACGAGGACTTCGTCCACTACCCGCTGCCCGAGTTCGCCAAAGAGCCGCCACAGAGGGACCGGTACCGGCTGGACGACGGCCGCCGCATCCGGGACCTGGACCGCGTGCTCATGGGCTACCAGACATACCCACAGGCCCTCACCCTGGTCTTTGACGACGTGCAGGGCCATGACCTCATGGGCAGCGTCACCCTGGACCACTTTGGGGAGGTGCCAGGTGGCCCGGCTAGAGGCGGCCAGGGCCGTGAGGTCCAGTGGCAGGTGTTTGTCCCCAGCGCTGAGAGCCGAGAGAAGCTCATCTCGCTGTTGGCCCGCCAGTGGGAGGCCCTTTGTGGCCGGGAGCTGCCCGTGGAGCTCACTGGCTAG

Related Sequences

bmy_11563T0 Protein

Length: 1471 aa      View alignments
>bmy_11563T0
MGPQFLPRCKERGRRCHAERGGTLGPGGLIQVYIIQVTDGSHEWTVKHRYSDFHDLHEKLVAERKIDKSLLPPKKIIGKNSRSLVEKREKDLEVYLQTLLATFPDVAPRVLAHFLHFHFYEINGITAALAEELFEKGEQLLGAGEVFAIRPLQLYAVTEQLQQGKPTCASGDAKTDLGHILDFTCRLKYLKVSGTEGPFGTSNIQEQLLPFDLSIFKSLHQVEISHCDAKRIRGLVASKPTLATMSVRFSATSMKEVLVPEASEFDEWEPAGAALEGTVTAVIPTWQALTALDLSHNSISEIDESVIEFLDLSHNGVLVVDNLQHLYNLVHLDLSYNKLSFLEGVHTKLGNIKTLNLAGNLLGSLSGLHKLYSLVNLDLSDNRIEQMEEVRSIGSLPCLEHVALLNNPLSIIPDYRTKVLAQFGERASEVSEDSRLSAAPCVRPSSSPPTVAPTSASLPQPILSNQGIMFVQEEALASSLSSTDSLTPEDRPIARGCSDSLESIPAGQAPSDDLRDVPGAVGGASPEHAEPEVQVVPGSGQIIFLPFTCIGYTATNQDFIQRLSTLIRQAIERQLPAWIEAANQREEGQGEQGEDDEEEEEDVTENRYFEMGPPDVEEEEEGGPGEEEEEEEEEEEEEEGEEERLALEWALGADEDFLLEHIRILKVLWCFLIHVQGSIRQFAACLVLTDFGIAVFEIPHQESRGSSQHILSSLRFVFCFPHGDLTEFGFLMPELCLVLKVRHSENTLFIISDAANLHEFHADLRSCFAPQHMAMLCSPVLYGSHTSLQEFLRQLLTFYKVAGGCQEHSQGCFPVYLVYSDKRMVQTAAGDYSGNIEWASCTLCSAVRRSCCAPSEAVKSAAIPYWLLLTPQHLNVIKADFNPMPNRGTHNCRNRNSFKLSRVPLSTVLLDPTRSCTQPRGAFADGHVLELLVGYRFVTAIFVLPHEKFHFLRIYNQLRASLQDLKTVVIAKTPATGGRPQSPPVDGQPAEDGARNEQHLQEVPAEAPAPAPAPAEVTALTPPKTPAPAEPSVPALVPAEAPASAETPSEASVGASAPAAEAAAQVEAPAQYPSDHLIRSTSEENQIPSHLPACPSLRHIASLRGSAIIEFFHSSVAEVENEELRHLLWSSVVFYQTPGLEVTACVLLSTKAVYFVLHDGLRRYFSEPLQDFWHQKNADYNNSPFHISQCFVLKLSDLQVVNVGLFDQYFRLTGSSPAQVVTCLTRDSYLTHCFLQHLMAVLSLLERTPSPEPVDKDFYSEFGNKTTGKMENYELIHSSRVKFTYPSEEEVGDLTFTVAQKVADPEKAPSLSILLYVQAFQVGTPLSGRCRGMLRPKTLLLTSAEIFLLDEDFVHYPLPEFAKEPPQRDRYRLDDGRRIRDLDRVLMGYQTYPQALTLVFDDVQGHDLMGSVTLDHFGEVPGGPARGGQGREVQWQVFVPSAESREKLISLLARQWEALCGRELPVELTG*