Sequence details bmy_11579 (Coding sequence)

Part of scaffold_632 (Scaffold)

For more information consult the page for scaffold_632 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SOD1 ENSTTRG00000010955 (Bottlenosed dolphin)

Gene Details

superoxide dismutase 1, soluble

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010388, Bottlenosed dolphin)

Protein Percentage 93.46%
cDNA percentage 95.42%
Ka/Ks Ratio 0.46986 (Ka = 0.0358, Ks = 0.0763)

SOD1 ENSBTAG00000027412 (Cow)

Gene Details

Superoxide dismutase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000039139, Cow)

Protein Percentage 88.82%
cDNA percentage 90.57%
Ka/Ks Ratio 0.31026 (Ka = 0.0651, Ks = 0.2097)

Additional orthologs identified in other species via the OPTIC pipeline.

SOD1 (Human)   Sod1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 480 bp    Location:136852..129327   Strand:-
Raw sequence 
>bmy_11579
ATGGTGACGAAGGCCGTGTGCGTGCTGAAGGGCGACGGCCCGGTGCAGGGTACCATCCACTTCGAGCAAAAGGAAGATGGGATGGTCGTGGAAGATGGGATGGTCGTGGTATCGGGATCCATTACAGGATTGACTGAAGGCGATCATGGATTCCATGTCCATCAATTTGGAGATAATACACAAGGCTGTACCAGTGCAGGTCCTCACTTTAATCCTCTATCCAAAAAACACGGTGGGCCAGAGGATGAAGAGAGGCATGTTGGAGACCTGGGCAATGTGAAGGCTGACAAAAATGGTGTGGCCGAAGTGTGTATTGCAGATTGTATAATCTCACTGTCCGGAGACCATTCCATCATTGGTCGCACAATGGTGGTCCATGAAAAACCAGATGACTTGGGCAGAGGTGGAAATGAAGAAAGTACAAAGACAGGAAACGCTGGAAGTCGTTTGGCCTGTGGTGTAATTGGGATCGCCGAATAA

Related Sequences

bmy_11579T0 Protein

Length: 160 aa      
>bmy_11579T0
MVTKAVCVLKGDGPVQGTIHFEQKEDGMVVEDGMVVVSGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPEDEERHVGDLGNVKADKNGVAEVCIADCIISLSGDHSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGIAE*