Sequence detailsbmy_11579 (Coding sequence)

Part of scaffold_632 (SequenceType object (1))

For more information consult the page for scaffold_632 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SOD1ENSTTRG00000010955 (Bottlenosed dolphin)

Gene Details

superoxide dismutase 1, soluble

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010388, Bottlenosed dolphin)

Protein Percentage 93.46%
cDNA percentage 95.42%
Ka/Ks Ratio 0.46986 (Ka = 0.0358, Ks = 0.0763)

SOD1ENSBTAG00000027412 (Cow)

Gene Details

Superoxide dismutase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000039139, Cow)

Protein Percentage 88.82%
cDNA percentage 90.57%
Ka/Ks Ratio 0.31026 (Ka = 0.0651, Ks = 0.2097)

Additional orthologs identified in other species via the OPTIC pipeline.

SOD1 (Human)   Sod1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 480 bp    Location:136852..129327   Strand:-
Raw sequence 
>bmy_11579
ATGGTGACGAAGGCCGTGTGCGTGCTGAAGGGCGACGGCCCGGTGCAGGGTACCATCCACTTCGAGCAAAAGGAAGATGGGATGGTCGTGGAAGATGGGATGGTCGTGGTATCGGGATCCATTACAGGATTGACTGAAGGCGATCATGGATTCCATGTCCATCAATTTGGAGATAATACACAAGGCTGTACCAGTGCAGGTCCTCACTTTAATCCTCTATCCAAAAAACACGGTGGGCCAGAGGATGAAGAGAGGCATGTTGGAGACCTGGGCAATGTGAAGGCTGACAAAAATGGTGTGGCCGAAGTGTGTATTGCAGATTGTATAATCTCACTGTCCGGAGACCATTCCATCATTGGTCGCACAATGGTGGTCCATGAAAAACCAGATGACTTGGGCAGAGGTGGAAATGAAGAAAGTACAAAGACAGGAAACGCTGGAAGTCGTTTGGCCTGTGGTGTAATTGGGATCGCCGAATAA

Related Sequences

bmy_11579T0 SequenceType object (3)

Length: 160 aa      
>bmy_11579T0
MVTKAVCVLKGDGPVQGTIHFEQKEDGMVVEDGMVVVSGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPEDEERHVGDLGNVKADKNGVAEVCIADCIISLSGDHSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGIAE*