Sequence detailsbmy_11580 (Coding sequence)

Part of scaffold_632 (SequenceType object (1))

For more information consult the page for scaffold_632 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TIAM1ENSTTRG00000012651 (Bottlenosed dolphin)

Gene Details

T-cell lymphoma invasion and metastasis 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012023, Bottlenosed dolphin)

Protein Percentage 81.1%
cDNA percentage 83.79%
Ka/Ks Ratio 0.52643 (Ka = 0.1184, Ks = 0.2249)

BT.74139ENSBTAG00000017839 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000023716, Cow)

Protein Percentage 82.28%
cDNA percentage 83.37%
Ka/Ks Ratio 0.42601 (Ka = 0.1481, Ks = 0.3477)

Additional orthologs identified in other species via the OPTIC pipeline.

TIAM1 (Human)   Tiam1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3423 bp    Location:549018..634688   Strand:+
Raw sequence 
>bmy_11580
ATGTCCCCTCTTGCCGTTCTTCAGGTGGCCGCTCGCACTGGTGAAACTGGAGTCAGAAGACGTACTCAGGCCATGTCCAGATCTGCTAGCAAGAGGAGGAGCAGGTTTTCTTCTCTTTGGGGTCTGGACACTACCTCCAAAAAGAAGCAGGGACGCCCAAGCATCAATCAGGTGTTCGGTGAGGGAACTGAGGCTGTAAAGAAATCTTTAGAGGGAATATTTGATGACACTGTTCCAGATGGCAAGAGGGAGAAAGAAATGGTCTTACCCAGCGTCCACCAGCACAGCCCTGACTGTGACATTTGGGTCCACGAGTATTTCACTCCGTCCTGGTTCTGTCTGCCAAATAATAAGCCAGTCCTGACAGTCGTCCGGCCAGGGGACACGGCCCGGGACGCCCTGGAGCTGATCTGCAAGAGACAAATGATTGAGCTCACTTCCTCTGTTTTTACCTTACGCTGTAGAAACTTCTTGATCTTTTTCAAGGACAGCTGGATGAATTGGATTGCCTTGACCATTCTCTTTCCTATTCTGTCTGATCCACATCATTTCACATCAGTTTGTCATCTGCCATCCGAGCACCAGTCAAGTTCTGGTATAGCACATAGACTGGATCATTCTGCTCATTACCTGCGCCTGAAATTTCTAATAGAAAACAAAATGCAACACTACGTGCCAAAGCCCGAGGAGGACATTTATGAGCTGCTGTACAAAGAAATTGAAATTTGTCCAAAAGTCACTCAGAACATCCAGATTGCGAAGTCAGATACAGCCGGTGATAATTATGGCTTTTCACTTTCTTCTGTGGAAGAAGATGGCGTTCGAAGGCTCTACGTGAATAGTGTAAAGGAAACTGGCTTAGCTTCCAAGAAAGGAACACTGGTGTTAGATAAAAACAAACGGTCGTCTGCTGCAACTCCCTTGCCCCATATAGCACTGTTCTCTGCGGATGCAAGAGTGATGCCCACTTGTCCACCTGGGTGGCAAACTATTCCCAGTATCCGGCCTGCAGAGGGCTGTGTCGGGAGAGGCCTGAAAGCGGGAGATGAGATTCTTGAGATCAATAATCGTGCTGCGGGCACCCTGAACGCCTCTGTGCTCAAAGATTTCCTCGCGCAGCTGTCCCTGGGCCTCCTGGTGAGGACCTACCCCGAGCTGGAGGGAGGAGCAGAGCTGCTGGGGAGCCCGCCTCTCCGGCTGGACGGCCCTGCCGACCTCAGCGAGAACCCTCTCGCCTTTCTCACCAGCAACACAGGTATGGCTGTGCACCGGGCTGCCCCTTGGAGGCTGCCCATGCGGCTTGCGTACTCTGAGTATTCTTGTTTTTCAAAGTCCCTTCTGAAGCTTGGCTTGGGATCAAAAATCCTTCAGAACCAAGTGTGCTTGGTCAAGTTAGGCAATCAACTTGGTTCAAGAATACAGCATGAAAGTAAAGTCACAGTGTACAGACTGTCCCTCATGGGCTTAAATGGAGCCTTAGTGAATGCATCTCATCCAAGTAAATCAAAGATAAATCAAAATGTAAGCTTCCATTCATGTGTTTGTACTGCTTCTAACCTCATTGTTGTCTATCCGGCTAATGGATACCTGGCCCATGGGCACAGCCTCTGCAGCCAGCAGGGCAGTAGTGCTGAGACTGCTCCGGAGGAGACCGAAGGGCCAGACTTGGAATCCTCAGATGAGACTGATCACAGCAGCAAGAGCACGGAACAGGTGGCCGCGTTTTGCCGCAGTCTGCACGAGATGAACCCCTCTGACCCGAGCCCGTCCCCCCAGGACTCTGCCGGGCCTCAGCTGGCCACCATGAGACAGCTAACGGACGCCGATAAGCTGCGCAAGGTCATCTGTGAGCTCCTGGAGACAGAGCGCACCTATGTGAAAGACTTAAACTGTCTCATGGAGAGATACCTAAAACCTCTTCAGAAAGAAACTTTTCTCACCCAAGATGAGCTTGATGTGCTCTTTGGAAATTTAACTGAAATGGTAGAGTTTCAAGTAGAATTCCTTAAAACTCTAGAAGATGGAGTGAGATTGGTACCTGATCTGGAAAAGCTTGAGAAAGTTGATCAATTTAAGAAAGTGCTGTTCTCTCTGGGGGGATCCTTTCTGTATTATGCTGACCGCTTCAAGCTCTACAGTGCCTTCTGTGCCAGCCACACGAAGGTCCCCAAAGTACTGGTGAAAGCCAAGATGGACGTGGCTTTCAAGGCGTTCCTGGATGCCCAGAACCCGAAGCAGCAGCACTCGTCCACCCTGGAGTCTTACCTCATCAAGCCCATCCAGAGGATCCTCAAGTACCCGCTTCTGCTGAAGGAGCTTTTTGCTCTGACGGACGCGGAGAGCGAGGAACATTACCACCTGGATTTGGCCATCAAGACTATGAATAAGGTTGCAAGTCATATCAATGAAATGCAGAAAATCCATGAAGAATTCGGGGCTGTGTTTGACCAGCTGATTGCTGAACAGACTGGTGAGAAAAAAGAGGTTGCAGATCTGAGCATGGGGGACCTGCTTTTGCACACCACTGTGATCTGGCCAAACCCGCCGGCCTCGCTGGGAAAGTGGAAAAAGGAGCCCGAATTGGCAGCTTTTGTCTTCAAAACTGCTGTGGTCCTTGTGTATAAAGATGGTTCCAAACAGAAGAGGAAACTTGTAGGATCTCACAGGCTTTCAATTTACGAGGACTGGGACCCCTTCCGATTTCGACACATGATTCCTACCGAAGCTTTGCAGGTTCGAGCTTTGGCAAGTGCAGACGCAGAAGCAAATGCTGTGTGTGAAATTGTCCACGTAAAATCGGAGTCTGAAGGGAGGCCGGAGAGGGTCTTCCACCTGTGCTGCAGCTCCCCAGAGAGCAGAAAGGATTTCTTGAAGGCTGTGCATTCCATCCTGCGTGATAAGCACAGAAGACAGCTCCTGAAGACCGAAAGCCTTCCCTCGTCCCAGCAATATGTCCCTTTTGGAGGAAAACGATTGTGTGCGCTGAAAGGGGCCAGGCCAGCCATGAGCAGGGCAGCTTCCGTGTTCATTTGGGGAAGCCTTGAGCTGCTACTAGAAAAGAGGAATCTGGAGTTCAAGTGGTCCCAGGAAAGGCTTCTGATCTCTGTTCTAAAGAATTTTCCGCCTGTTCTCAATTGTGTTGAAGAGGCAGGAAAGTCTTTTATCACTCTGCTTTTGAAGCGCCTCACTATCGTCAGAATCTTCAAATTAGATGATTTAAAAATGGTGTTGGAGTGGATGATAGAACACTCAGGAATGATGATGGAAGCACAGGGGTCGGAGACAGAGGGTGGTCAGAGCGGGAGCCAATTTAGACCACTATCCAGCTCACTGACCTTGTACCTGCTGTATTTGAAGCCAAGGCTGCATTTGGCGGTAATTATGAATAGTCACCTTACTTCTAGCAGCACTGAAGCAGTTTAA

Related Sequences

bmy_11580T0 SequenceType object (3)

Length: 1141 aa      View alignments
>bmy_11580T0
MSPLAVLQVAARTGETGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGTEAVKKSLEGIFDDTVPDGKREKEMVLPSVHQHSPDCDIWVHEYFTPSWFCLPNNKPVLTVVRPGDTARDALELICKRQMIELTSSVFTLRCRNFLIFFKDSWMNWIALTILFPILSDPHHFTSVCHLPSEHQSSSGIAHRLDHSAHYLRLKFLIENKMQHYVPKPEEDIYELLYKEIEICPKVTQNIQIAKSDTAGDNYGFSLSSVEEDGVRRLYVNSVKETGLASKKGTLVLDKNKRSSAATPLPHIALFSADARVMPTCPPGWQTIPSIRPAEGCVGRGLKAGDEILEINNRAAGTLNASVLKDFLAQLSLGLLVRTYPELEGGAELLGSPPLRLDGPADLSENPLAFLTSNTGMAVHRAAPWRLPMRLAYSEYSCFSKSLLKLGLGSKILQNQVCLVKLGNQLGSRIQHESKVTVYRLSLMGLNGALVNASHPSKSKINQNVSFHSCVCTASNLIVVYPANGYLAHGHSLCSQQGSSAETAPEETEGPDLESSDETDHSSKSTEQVAAFCRSLHEMNPSDPSPSPQDSAGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTQDELDVLFGNLTEMVEFQVEFLKTLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKMDVAFKAFLDAQNPKQQHSSTLESYLIKPIQRILKYPLLLKELFALTDAESEEHYHLDLAIKTMNKVASHINEMQKIHEEFGAVFDQLIAEQTGEKKEVADLSMGDLLLHTTVIWPNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKRKLVGSHRLSIYEDWDPFRFRHMIPTEALQVRALASADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMSRAASVFIWGSLELLLEKRNLEFKWSQERLLISVLKNFPPVLNCVEEAGKSFITLLLKRLTIVRIFKLDDLKMVLEWMIEHSGMMMEAQGSETEGGQSGSQFRPLSSSLTLYLLYLKPRLHLAVIMNSHLTSSSTEAV*